Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1225 ATGGCTTCGCACTCGCACTGTAGGACTGTACCCATCTACCTCGACCCTTCTAGAACCCCATCTCCGCACAATCCCTCGTTTTTCTACCCATCCCGCACCAAACGGCATCGTTTCGCCTCTTGCTCTTTGCACCGCCAGAGCCAGCGCCACTCTCCTTCGCCAGTTACATCCAGTTCGGGTCACGGGTCAAGCAAGCCCGTTATCCTAGACGCGAATTCGGATCCCACCGCTAATGATGAGAAAAGCCGTTCGAGTGAAAACCCAACCCGTTTGAGTGAGACCCGGACCCGGAGTTTCACGTCCGTGTTCGGATTCCGAAAGCGGTATCTGTGGCGGAGGATTCTGCTCCCATCGAGGAAAGTGAGAAGCATCATTTTGCTGAATGTCATCACTTTTATTTACGCTAGTAACATTCCAGTTGTCAAAGAGGTTCAGGCAATTATGAATCCAGCAGCTTTCACATTTGTGCGCTTTGCTCTTTCTGCCATTCCTTTCATCCCATTTGTATTGCGAGGGTGGGGAGATTCTTGTACCAGAAATGCAGGCATGGAGTTGGGTTTGTGGGTCAGTCTGGGATATCTTATGCAGGCACTTGGACTACAAACCTCTGATGCTGGTCGCGCATCATTTTTATCTATGTTCACTGTAATTGTGGTTCCATTACTTGATGGATTGCTTGGAGCAGTAGTTCCAGCTAGAACCTGGTTTGGAGCTCTCATATCGATTGTAGGAGTTGGAATGCTGGAATCCAGTGGTTCATCCCCATGTGTTGGAGATCTTTTGAACTTTTTAAGTGCAGTGTTTTTTGGCGTTCATATGCTAAGAACTGAACATATATCGAGAAGCATAAGTAAAGAGAAGTTTCTGCCCCTCCTCGGATTTGAGATTtgcattgttgttttgttttctacaATATGGTATCTTCTTGGAGGTTCCATTAATGGTGCCCAGCATCCCTTGCCATCATCCTTGACGTGGAAAATGCTTAGAGACTGGATGGTTGGTTTTCCGTGGATACCTGCAATTTATACAGGGATATTCTCAACTGGTTTATGCTTGTGGGTAGAGATTCAATTGCAGATGGCTGCAATGTGTGACGTATCAGCCACAGAAACTGCTATGATTTATGGTCTGGAGCCAGTCTGGGGTGCTGGTTTTGCATGGTTTCTTCTTGGTGAAAGGTGGGGTTCCACAGGATGGATTGGTGCTGCCCTTGTGCTAGGGGGAAGCTTAACAGTGCAGATATTTGGAACCTCAAGTAATTCAAACAAAGAACAAAAGCGAAGTGAGAAAGGTGACAACCTGATGATTTCTGACAAAAAGAATGGTTTGTCTACATCCACTGTAATCCTTAGATCCAGAACGGATGCCTCTGACTTTTTCAAGTAG 1389 0.4586 MASHSHCRTVPIYLDPSRTPSPHNPSFFYPSRTKRHRFASCSLHRQSQRHSPSPVTSSSGHGSSKPVILDANSDPTANDEKSRSSENPTRLSETRTRSFTSVFGFRKRYLWRRILLPSRKVRSIILLNVITFIYASNIPVVKEVQAIMNPAAFTFVRFALSAIPFIPFVLRGWGDSCTRNAGMELGLWVSLGYLMQALGLQTSDAGRASFLSMFTVIVVPLLDGLLGAVVPARTWFGALISIVGVGMLESSGSSPCVGDLLNFLSAVFFGVHMLRTEHISRSISKEKFLPLLGFEICIVVLFSTIWYLLGGSINGAQHPLPSSLTWKMLRDWMVGFPWIPAIYTGIFSTGLCLWVEIQLQMAAMCDVSATETAMIYGLEPVWGAGFAWFLLGERWGSTGWIGAALVLGGSLTVQIFGTSSNSNKEQKRSEKGDNLMISDKKNGLSTSTVILRSRTDASDFFK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1225 462 Pfam EamA-like transporter family 258 411 IPR000620 GO:0016020|GO:0016021
Ssu2g1225 462 Pfam EamA-like transporter family 123 247 IPR000620 GO:0016020|GO:0016021
Ssu2g1225 462 PANTHER - 76 461 - -
Ssu2g1225 462 SUPERFAMILY Multidrug resistance efflux transporter EmrE 325 417 - -
Ssu2g1225 462 PANTHER OS03G0707200 PROTEIN-RELATED 76 461 - -
Ssu2g1225 462 MobiDBLite consensus disorder prediction 44 71 - -
Ssu2g1225 462 SUPERFAMILY Multidrug resistance efflux transporter EmrE 157 251 - -
Ssu2g1225 462 MobiDBLite consensus disorder prediction 76 90 - -
Ssu2g1225 462 MobiDBLite consensus disorder prediction 1 93 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1225 2 53681790 53688009 Ssu2g1225 2 53681790 53688009 ECH