Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1009 ATGCATGTCCACATCTCCAATCATTCCTTCACCGTGACCAAACCCACCAGCACTAGTAGTAGCACTCTCAACCTCGCCCCCTCCTCCAACATGGCAAACTTCTTCTTCTCCCTCGCTCTCTTCCTCTTGAAACACATCCACATCTTGGAACTCACCATTGCAGCCACCCTTTTCACTGCCCTtcaagttttcatctcaaagaGGCACCACGGCCTACCCATTTGGCCAGTCCTCAGAATGCTCCCTTCCCTTCTCTCAGGCCTCAAAACCAACCTCTACGAATGGCTCACCGACGTCCTCAACCTCCAAAACGGAACCTTCGCATTCCAAGGACCCTGGTTCACCAACCTCAACTGTGTCATCACCTCAGACCCTCGCAACCTCGAATACCTTCTCAAAACCAAGTTCTCTTCCTTCCCTAAAGGAAAGTTCTTCAGGTACACGCTTCGTGACCTGCTAGGAGATGGCATATTCAACGCAGACAGTGAAACATGGCAGCGACAAAGGAAGACGGCGAGCCCGGAGTTTCACTCCCGAATGTTCAGAAAACTAACCGCCGAGTCACTCTTTGAGCTTGTCCACAAAAGACTCCTACCTCTGTTAGATTCATGTGTTGATAAATCATGTGTGATAGACCTTCAGGATGTTTTACTAAGGCTGACTTTTGATAATGTGTGCATGATAGCCTTTGGTGTTGACCCGGGTTGTTCACAACCCCACTTGCCAGAGATTCCATTCGCCACAGCCTTTGAGGATGTAACTGAAACCTCCATGAAGAGATTCATCATCCCGGTGTGGATGTGGAAGTTCATGAGGTTCCTCAACGTGGGGGTGGAGAGGAGGCTGAAGGAATCGATAACGAAGGTTGATGAGTTTGCTGTGAGTGTTATTGGGACAAGGAAGAAGGAGCTCTCATTGCAGCATGAGAAGTCTGATTTGTTGACTGTGTTCATGAGGCTCAAAGATGAGAATGGACAAGCTTATTCAGATAAGTTTCTGAGGGACATTTGTGTGAATTTCATATTGGCAGGGAGGGACACTTCTTCTGTGGCTTTGAGCTGGTTCTTCTGGCTGCTTCATCAGAATCCTAAAGTGGAGGAGTGCATTGTGGGTGAGATTTGCAGGGTGGTGAGTCAGAGGGAGGGGTTCAAGAAGGAAGAGGTTGGGAATTCTTTGGCTTTGAGGCCTGAGGAGATAAAGAAGATGGAGTATCTGCATGCTGCCCTTTCAGAAGCTCTCAGGTTATATCCTTCTGTGCCTGTGGATCACAAGGAGgTGGTGGAAGATGTGACTTTACCTGATGGAACTGTGCTAATGAAAGGCACAAAAGTGATATATGCAATTTATGCAATGGGGAGAATGGAAAGCATATGGGGCAAGGACTGCAGGCAGTTCAAGCCAGAGAGGTGGCTGAGTGATGGGCGCTTCATGAGTGAGTCTGCTTACAGATTCCCTGCCTTCAATGGAGGACCTCGCTTGTGCTTAGGCAAAGATTTTGCATACTATCAGATGAAATATGCTGCGGCTAGCATGATATTCCGCTACCATGTTAAGGTGGTTGAGAAACACCCTGTGGTGCCAAAGCTTTTTTTGACTCTCCCCATGAAGCATGGATTGAAAGTCAACATTCACAGGCGTGATGCCGCAGAAATTGAGAAATATAATGAGATGCTTGTGTTTGAGATTTACGACTTAAATCAGGACATGCCAATTAATATCAAGACTGCTATATCCTACTGGAACACAGCAAAATTGCAGCCGCGACCAAagccgcaatttagaaccatgagtGTTCCTGATCCTTTGGATGACTCTAGTGTACCGTACTCAAGAGTGGACATGTTCTATTTTGCTTACTCTGCTGTATGGTGCCTTTGGTTTGGTGGATGGGAAAGAAGGAAGGacagaaaatttgaattgaatcgaaagtag 1932 0.4555 MHVHISNHSFTVTKPTSTSSSTLNLAPSSNMANFFFSLALFLLKHIHILELTIAATLFTALQVFISKRHHGLPIWPVLRMLPSLLSGLKTNLYEWLTDVLNLQNGTFAFQGPWFTNLNCVITSDPRNLEYLLKTKFSSFPKGKFFRYTLRDLLGDGIFNADSETWQRQRKTASPEFHSRMFRKLTAESLFELVHKRLLPLLDSCVDKSCVIDLQDVLLRLTFDNVCMIAFGVDPGCSQPHLPEIPFATAFEDVTETSMKRFIIPVWMWKFMRFLNVGVERRLKESITKVDEFAVSVIGTRKKELSLQHEKSDLLTVFMRLKDENGQAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLHQNPKVEECIVGEICRVVSQREGFKKEEVGNSLALRPEEIKKMEYLHAALSEALRLYPSVPVDHKEVVEDVTLPDGTVLMKGTKVIYAIYAMGRMESIWGKDCRQFKPERWLSDGRFMSESAYRFPAFNGGPRLCLGKDFAYYQMKYAAASMIFRYHVKVVEKHPVVPKLFLTLPMKHGLKVNIHRRDAAEIEKYNEMLVFEIYDLNQDMPINIKTAISYWNTAKLQPRPKPQFRTMSVPDPLDDSSVPYSRVDMFYFAYSAVWCLWFGGWERRKDRKFELNRK 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1009 643 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PRINTS E-class P450 group I signature 406 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 Gene3D Cytochrome P450 68 561 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 MobiDBLite consensus disorder prediction 1 20 - -
Ssu2g1009 643 Pfam Cytochrome P450 113 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Ssu2g1009 643 SUPERFAMILY Cytochrome P450 71 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PANTHER CYTOCHROME P450 86B1-LIKE 36 547 - -
Ssu2g1009 643 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g1009 643 PANTHER CYTOCHROME P450 36 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1009 Ssu-Chr2 47686600 47692469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1009 37 554 Cytochrome P450 AT5G23190 68.199 0.0 739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1009 2 47686600 47692469 Ssu2g1009 2 47686600 47692469 ECH