Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0532 ATGGAGATGGCAAGCATCGCAACTGATTTGGCAAAGTCAATTTTGGAGAAATTAATAGATGCAACAATAGTACAATCAGGTTATATTTGTTGCTTCACGTGCATTGCTAAGGagtttgaaaaggaaaagaaaactttgAAAGCAAAAAGGACAACTGTGGGGGAATATGTTAAAGTGGCAAACAGAAGAGCCGAAGGCATACGAAGTGATGTCATTTTTTGGCAAGAGCAAGTTGATAAGCTTATTCAAGAGGACACCAAAACAAGAATGACATGCTTTTCTGGGTGGTGTCCTAATTGCAAATGGCAATATAGTAGGGGAAAGGATCTGGCAAATAAGACTAAGAAGATTAAAAGACTCATGGAAAGTAACTTCGAAAGTGTTGGTATCCCTCGTGCTGTTGCAGGTGTTGAATATCATTCTTCTCAAGATTACATTTCTTTCAAAAGTAGAGAGTTGAAATGCAAAGAACTTTTGGATGCACTGACAAATGACAACAACTATATGACTGGATTGCAAGGGATGGGGGGCACAGGTAAAACAACATTAGCAAAAGAAGTGGGTAAGGAGCTTAAGAAATCAGAAAAGTTTGATCATGTTATTGATGCTACTGTATCTTATGCTCCTGATATCAAAAAGATTCAAGATGAAATTGCAGGACCATTAGGATTGTCATTGGAGTATTGTACCGAACCAGAGAAGCCTAAAACATTATGGAGTAGATTGATCAATGGTGAGAAAATTCTTCTAATACTAGATGATGTGTGggaaaatatcaattttgaaGACATAGGGATTCCATATAATGACAATCATAATGGTTGCAGAATTCTTATAACCACCTGCAATCTGAGGACATGCAACTCAATGCGATGTGACAGGATAATTCAACTTGAGCTCTTACCTGAGGAAGATGCATGGATCTTGTTCAAAAAGCGTGCTGGTATAAGTGATAGTTCCTCTAAAAGTATTCTAGATAAGGGTCGTAAAATTGCCAAAGAATGCAAAGGATTACCAATTGCAATTGCAGTTATCGCTAGCAGTATAAAGGGAGAGCAACGCCCAGAAGAATGGAACGTAGCCTTAAAATCCTTGCAGGATTGTTCCTTGCGTGGTGATGACGAAAATTTgggtaaaatttataaatgtttgaGGTATAGCTATGACAATATGAACAATGAAAAAGCTACGGGATTGTTCCTTTTATGTTCTATGTTCCGAGAAGATCAAGAATTTTCTGTTGAAATTTTAACTAGATTTTCTGTAGGAGTGGGCCTTGTTGGGGAAATTGATGACAATTACGATGCAGGTCGAAATGAAGTGGTTGTAGCCAAAAATAAACTCATAGATTCATGTTTATTGTTGAATGGTGAATCTGGAAGAGTGAAAATGCATGACTTGGTTCGTGAAGTGGCCTTACTAATAGCTAACGAAGAGATTAAAGCAGttaatacatcaaacaaaaatgaaaagtcaTTGGTTGAAAAGGCGAAGAATCTTAAATATTTGCTATGTGAAGGCAAGAGCATGGATGTGTTTTCCTTGAAATTTGATGGATCTAAACTTGGGATTCTAATTGTCTACTTGGATGGAGACGAAAATGATTCTGTGGAAGTCCCAAATTCATTCTTCGAAAACATTATAGGGCTTCGAGTTTTGTATTTATCACATAAGACCTGGATCTGGCGGAAGGCAACTCTATCATTACCACAGTCAATTCAGTCATTGACCAATATTCGATCTTTGTACCTTGAAAGATTCGACTTAGGTGACATCTCTATTCTTGGAAACCTACGGGGCCTTGAGACTCTTGATTTGGTTGATTGTTTAATGGATGAATTGCCACCTGAGTTTGCAGAACTGAAGAAACTTAAATTGTTGAACTTGGATTGGTGTTATATTAGATGGAGTAATCCATTTAAAGTGATTGAAAGTTGCTCTTCATTGGAAGAATTGCACTTTGTTCGTAGTTTTCCGATTGACAGGTTAACAATGCACCAAAAAGTAAAGCTTCCTAAATTACATAGGTTTCGTATAGTGGATGAGTGTCCTTTCTATTTTAGGGCAGATTGGTCAGGAAGGAATTCCCTGTCTATTTCAAAGGTTGATGTTTTTTTCTCTGAAGTGACATTCAAGCATTTAGTGCAAACAACGGAGTTTCTTAATCTATTTGGACTTCAAGGGGGATGGCGAAATCTCATTCCTGAGATTATTCTGCCTGAATATGAAGGTACACTTAATCTAGTTGTGCTTTGCTTGAAATCTATATCACAACTAGAGTGCCTTGTTGACACTAAGCATATTGATTCTCGTGTACAAAATGTCTTCTCCAAGTTGATTGAACTTAGACTTGAAGAAATGGAAAATTTGAAAGAGCTATACAGTGGTCCCCTTCCCTTCGAACTTATGAAAAGCCTAGAGACGTTGTATGTGCGTAACTGTATACATTTAGGAGGCATATTGTTTAAGAGCAAGCTAACCCTCTGCAATCTTAAGTCCATGAGTTTGAACAATTGCCCAATGTTGACATCGCTGTTTCAATTGTCCACCACACAAAGCCTAGTGCTGTTGGAGCGTTTGTTTATAGAGAATTGtgaacaaatgaaaagtataataACAGATGAAAGAACAAGGGAGGATTTAGAAGAAGAAATagttgatgatgataatgataacaAGAGTGCTGGTTCAatgtttccaaatttaaaaactctTCAAATCAAGAGGTGTCCCCAGTTAGATTTTATACTTCCCATGGTTGCTGCTCGAGATGTTCCAAAACTGGAAGATATCGAAATACGTGACTGTGTTGAGCTAAAATACATATTTGACACATACCAAAATAAACACGAAGAGCAAGATTTGCAGCAGGAGCTGAAGGATGTCATATTTGTTACTCTAAAAAAAATGGTTCTAAACGGCTTGCCAAATTTTGTTGACATTTTTCCAGAATGTGATCAATCCATGCATTCATCTGTGAAGAAGTTGTGTTCCAAAGATGACTCCGAGACACAAATAGAATCAGACCCCatcaaatgtaatattttaccTTGGATCAATTGCAAGACTACAAAAATCCCTTTGCATTCCAAGGATCAATTGCAAGGCTGCTTTCTCTCATCGATACATGACTCGAAAGTCAATGATGTAATTAGACAAGAAATGGCTGTAACTTTTCAGTTGAGTGATATGCATCAGATGACATGCCTTTTTGTGGTCCCCAAcatttattatactttaaaaaatgttacgGTGTTACGGATTACGAACTGTGAAAGAATGGAAGTAATATTTTCAGCTTCAATGCTAAGGTGCTTACCGCAGTTGCATATTCTAGACATAAGTGGATGCAATGGATTAAAACAGATCATTGAAGAGGATACAAGGAATCAGAGAAtgtcatattttctttctccacaGACACTGTTTCCAATGCTAAAAGTTCTTGTTATCGAAGAATGCAATAATTTGAAATGTGTCTTTCCTATTTccacttctaaaatattttccaaGCTCGAGTTTCTGGTAATTAAAAAGGCATGTATGCTAGAGGAAGTTTTCAAATGTGAAAGTGATCAAAAAGTTGAGATTTCAAATCTAAAAATTGCAGTATTTGTTGAACTTCCAAGCCTTTTCCAGGAGATTGAATTTCAAACTGTAAAAGATCGTTTGGTGCAGAATTGTCCAAAACTCTCTTTGACTTCAACATTAACTCCTGACAGGATCCGACAAATTATTTATTCTGGCATGGAAGcttgtaagaatattgattttgaaatcGTTTCTCAGGCAACTACCAAAAAAGAACCAACACTCAAGGCTAAAGTACAAAAGCCATCATTTAGTCCAGCAGATGAGGAATCATCTTCAAGTTCATATGAAGATGAACAGGAAGTCCAAGGATCAAACTACTCAACCCCTTCACTTAGTGAAGCTCTTGAAAAAACTCCACCTCAAGAGGCAAGCAAAGAGCAGAGCTCAAATGAGTCCATCGACAACAACAAAAGGGTTCCAAAGTACACTGCTATGGACATCGACAATTGCCTGAAAAAACTTGATGATGATCCATTTGCACTGTTGGACTTCATGTCACGAGAGGTTTCAATGTCACCCAAGCAACACAAAACCAACGTGCAACAATCTTCGACAATTGAAACATTAGCCTCTGCATTGCTTGAACTTCGAACACTTGCATTCTCCCAATCAATGATGAAGAATATCGGTAAGGTTGAGTACAGGGAGAAGGTTGAAGCTGCTATTAGGAAACTTGATAAGTTTCCAAAGGATACTGACCAAGACCTCGATAAGAGAATCAGATCTTTTATTGAGCTTTTCAAAAAAGCAGAAGAAGTTTGCCAAGAGCAGTCTTCGACTGTTGACCTGATTAAGCAAGCTGATGCAGAGAAGAAAGAGGCCCTGGAGAAATTACAAACAACGAAAGATAAAGTTCTTCAACTTGATGAGGCCATTGAGAAACGTAAGCCAAAACTCGAAGACATCGAGAAGCGCCAAAAAGAGGTCAAGGATGCAATGAAGAAACTCCAGGAGGAATTGAATGAGCTGGACAAAGACAAGGCAAAATTGGAGTCTGAAAACACCGAATGTTCTTCAAAGAAGGCAGAACTTATCGAATCAGTCAAGTATGTTTCGAATGCCTTAGGAAAGACTTCCAAACATCTGGTTGATCTCGAGAAGACCAAGGCCAAACATGATGCAAATTTTGAAGCCTTAAAAGATCCTTACAAGAAGATGAAGGCCAATCCTCCCTTTTGA 4773 0.3616 MEMASIATDLAKSILEKLIDATIVQSGYICCFTCIAKEFEKEKKTLKAKRTTVGEYVKVANRRAEGIRSDVIFWQEQVDKLIQEDTKTRMTCFSGWCPNCKWQYSRGKDLANKTKKIKRLMESNFESVGIPRAVAGVEYHSSQDYISFKSRELKCKELLDALTNDNNYMTGLQGMGGTGKTTLAKEVGKELKKSEKFDHVIDATVSYAPDIKKIQDEIAGPLGLSLEYCTEPEKPKTLWSRLINGEKILLILDDVWENINFEDIGIPYNDNHNGCRILITTCNLRTCNSMRCDRIIQLELLPEEDAWILFKKRAGISDSSSKSILDKGRKIAKECKGLPIAIAVIASSIKGEQRPEEWNVALKSLQDCSLRGDDENLGKIYKCLRYSYDNMNNEKATGLFLLCSMFREDQEFSVEILTRFSVGVGLVGEIDDNYDAGRNEVVVAKNKLIDSCLLLNGESGRVKMHDLVREVALLIANEEIKAVNTSNKNEKSLVEKAKNLKYLLCEGKSMDVFSLKFDGSKLGILIVYLDGDENDSVEVPNSFFENIIGLRVLYLSHKTWIWRKATLSLPQSIQSLTNIRSLYLERFDLGDISILGNLRGLETLDLVDCLMDELPPEFAELKKLKLLNLDWCYIRWSNPFKVIESCSSLEELHFVRSFPIDRLTMHQKVKLPKLHRFRIVDECPFYFRADWSGRNSLSISKVDVFFSEVTFKHLVQTTEFLNLFGLQGGWRNLIPEIILPEYEGTLNLVVLCLKSISQLECLVDTKHIDSRVQNVFSKLIELRLEEMENLKELYSGPLPFELMKSLETLYVRNCIHLGGILFKSKLTLCNLKSMSLNNCPMLTSLFQLSTTQSLVLLERLFIENCEQMKSIITDERTREDLEEEIVDDDNDNKSAGSMFPNLKTLQIKRCPQLDFILPMVAARDVPKLEDIEIRDCVELKYIFDTYQNKHEEQDLQQELKDVIFVTLKKMVLNGLPNFVDIFPECDQSMHSSVKKLCSKDDSETQIESDPIKCNILPWINCKTTKIPLHSKDQLQGCFLSSIHDSKVNDVIRQEMAVTFQLSDMHQMTCLFVVPNIYYTLKNVTVLRITNCERMEVIFSASMLRCLPQLHILDISGCNGLKQIIEEDTRNQRMSYFLSPQTLFPMLKVLVIEECNNLKCVFPISTSKIFSKLEFLVIKKACMLEEVFKCESDQKVEISNLKIAVFVELPSLFQEIEFQTVKDRLVQNCPKLSLTSTLTPDRIRQIIYSGMEACKNIDFEIVSQATTKKEPTLKAKVQKPSFSPADEESSSSSYEDEQEVQGSNYSTPSLSEALEKTPPQEASKEQSSNESIDNNKRVPKYTAMDIDNCLKKLDDDPFALLDFMSREVSMSPKQHKTNVQQSSTIETLASALLELRTLAFSQSMMKNIGKVEYREKVEAAIRKLDKFPKDTDQDLDKRIRSFIELFKKAEEVCQEQSSTVDLIKQADAEKKEALEKLQTTKDKVLQLDEAIEKRKPKLEDIEKRQKEVKDAMKKLQEELNELDKDKAKLESENTECSSKKAELIESVKYVSNALGKTSKHLVDLEKTKAKHDANFEALKDPYKKMKANPPF 1590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0532 1590 PANTHER - 94 985 - -
Ssu2g0532 1590 PRINTS Disease resistance protein signature 169 184 - -
Ssu2g0532 1590 PRINTS Disease resistance protein signature 826 842 - -
Ssu2g0532 1590 PRINTS Disease resistance protein signature 242 256 - -
Ssu2g0532 1590 PRINTS Disease resistance protein signature 335 349 - -
Ssu2g0532 1590 Pfam NB-ARC domain 156 390 IPR002182 GO:0043531
Ssu2g0532 1590 SUPERFAMILY RNI-like 1072 1180 - -
Ssu2g0532 1590 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 94 985 - -
Ssu2g0532 1590 Gene3D - 133 297 IPR027417 -
Ssu2g0532 1590 Gene3D Ribonuclease Inhibitor 456 685 IPR032675 -
Ssu2g0532 1590 Coils Coil 1497 1538 - -
Ssu2g0532 1590 Coils Coil 1462 1489 - -
Ssu2g0532 1590 Gene3D Ribonuclease Inhibitor 1019 1202 IPR032675 -
Ssu2g0532 1590 Gene3D Ribonuclease Inhibitor 828 1004 IPR032675 -
Ssu2g0532 1590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 394 IPR027417 -
Ssu2g0532 1590 MobiDBLite consensus disorder prediction 1269 1335 - -
Ssu2g0532 1590 SUPERFAMILY L domain-like 460 945 - -
Ssu2g0532 1590 MobiDBLite consensus disorder prediction 1282 1335 - -
Ssu2g0532 1590 Gene3D - 301 392 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0532 Ssu-Chr2 31314238 31334601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0532 170 807 WRKY Transcription Factor Family AT5G45050 23.042 1.99e-16 83.6