Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0510 atgtttctctcttctttcatgGATGGGTTTGGTGCCGCTGCTCCCAACGCCGAAGATCACAAACAACTCGGACACGCTTCTAAAGAAGGTGAAGTATTTGATGCATCACAGTATGCATTCTTTGGTAAAGATGTTGCTGAGGAAGTTGAGTTAGGGGGGTTAGAAGATGAAGATGACTATAAGGCTATGCCTGCTATTGAGTTCAATGAGGAAGATTTCTTTCGCGATAAAGAAGAGGCGGAGGATGTAAGATCTCTTTCCGATATTGATGATCTCACTACCACTTTTTTAAAGTTGAACAAGGTTGTTAGTGGACCAAGAAGCCCAGGAGTTATTGGTGAACGGGGATCAAGAGAAAATTCCTCTGCTTCTGAATGGTCACAAAGGGATGACACACCCTACTGGTTTGATCAGCACGCTTATGACAGTGAAGGGCAAGGCTCTCAGGATGGCAAAAGATGGTCATCACATCCCCATTCTTCTCTAACTCAGCTACATGACTCAAGGGCCTTGTACAGAACATCTTCATATCCTGAGCAGCAACGACAGCTGCAGCACCAACTCCAACACTGCTCTAGTGAACCTGTTCCTAGCTGGTTTGATCAGCATTTTCATGATAGTGAAACTACTGAGGATGGAAAGAGATGGTCATCACAGCCACATTCCTCCATTGCCCTCTTACAAGAATCAAAGCCCTTGTATAGAACATCATCTTATCCTGACAAGCGACAGGAGCTAACTCGTTTTTCTAGTGAACCAATTTTGGTACCAAAATCTTCATTTACTTCTTATCCTCCCCCTGGTGGTAGGTCCCAACAGTTCTCTCCAAATCACAGTACAGGTCACTTGAACATTCCTTTTCATGCTGGTGGAGGTCATATGGCTTTACCGTCACAAAATCGTTCTCATTTGTTCAATTCTGCACTACTGTTGAGTGGATCAAAACACGAGTCACAGTTTAGTGGAAATGTGCACCAATTTACAACTGGCTCCCCTCTTAATTATCGAATGCAGAATCCCTGGGTCAACCAATCAGGGTTGTATTCTGGAGATCATCCAAACCTCCTCAGTAATATGTTGCAGCAACAATTACACCATCATAGTGGATCATTATCACCTCATTTATTGACCCAATTGCGGCAACAGCAGCATAGACTGCATCATCCCGTTCAACAATCAGGAGGCTACATGTCAGGTTTCCAATCCCATTTATTTAATCCTCAGCTTTCTTCTGGATCATCCATGGTTAGCAGATATGAACATATGCTTGGTCTTGCTGATGTTAGAGAACACAGACCAAAATCAACTCATAAGGGTAAACAGAGTCATCGTTTCTCACAACAGGGTTCTGATGCTAGTAACCAGAAGAATGAAAGTGGTTCATTACAGTTTAGGTCCAAGTATATGACTAGTGATGAAATAGAGAGTATTCTTAGAATGCAGCTAGCTGTGACTCATTGTAATGATCCCTATGTTGATGACTATTATCACCAAGCTTGTCTTGCTAAAAAACCTTCGGCTAAGTTGAAACATTCATTTTGCCCAACACAAATAAAGGAACTTCCTCCACGAGCCCGTTCCAATACTGAGTCCCATGGTTTTCTTCAGGTCGATGCTTTAGGGAGGGTTTCATTCTTGGCTATTCGTCGGCCTCGTGCTCTTCTTGAAGTTGATCCTTCAAACTCTTCTATTAGTGGTAGCTTTGAGCGAAATATTTCAGAGAAGCCCCTTGAACAGGAGCCTCTGTTTGCGGCCAGAGTCACAATTGAGGATGGTCTATGTCTTCTTCTTGATGTAGAGGATATTGATCGTTTTCTACAGAGTAATCAGCTACAAGATGGTGGAACTCAATTAAGACGAAGACGGAAGGTCCTTTTGGAAGGACTAGCAACATCACTCCAACTTGTTGACCCACTGGGAAAGAATGGACACAAAGTTGGGCTTGGTGCTAAGGATGATGTTGTTTTCTTACGATTAGTATCCATACCCAAAGGGTGTAAACTCCTAGCAAAGTATCTTCAGTTACTTGTTCCTGGTAGCGAGCTTATGCGGATAGTCTGCATGGCCATTTTTCGTCATTTGAGATTCTTATTTGGTGGTCTCCCCTCTGATCTGACAGCTGCAGAGACTGCAAGTGACCTTGCTAAGATTGTTTGTCAGTGTGTTCAAGGAATGGATCTTGGTGCCCTAGGTGCTTGTCTTGCTGCAGTGGTTTGTTCCTCAGAGCAACCTCCTCTACGTCCTCTTGGAAGCACCACTGGAGATGGTGCCTCCCGTATTTTAGTATCTGTTCTTGAGAGGGCCACTGAACTTCTAACTGATCCCCATGGTGCTTGCAGCTATATAGGTAATCGTTCGTTTTGGCAGGCCtcatttgatgaattttttggCCTTCTCACAATGTATTGCATGAATAAATACCAAAGTATCATGCAATCACTGCTTATACAAGGGACGCCTAATGTGGCTGTAATTGGATCAGATGCTGCTAAAGCAATTAGTAGGGAAATGCCTGTTGAACTCTTACGAGCAAGTCTTCCTCACACCAATGATCACCAGAGGAAATTATTACTGGATTTTGCTCAGCGCTCTGTGCCTGTGGTTGGATTTAACAGTTATACTGGGAGCAGCAGTGGTCATGTGAACTCAGAAACTGTGCTAAGTTGA 2667 0.4293 MFLSSFMDGFGAAAPNAEDHKQLGHASKEGEVFDASQYAFFGKDVAEEVELGGLEDEDDYKAMPAIEFNEEDFFRDKEEAEDVRSLSDIDDLTTTFLKLNKVVSGPRSPGVIGERGSRENSSASEWSQRDDTPYWFDQHAYDSEGQGSQDGKRWSSHPHSSLTQLHDSRALYRTSSYPEQQRQLQHQLQHCSSEPVPSWFDQHFHDSETTEDGKRWSSQPHSSIALLQESKPLYRTSSYPDKRQELTRFSSEPILVPKSSFTSYPPPGGRSQQFSPNHSTGHLNIPFHAGGGHMALPSQNRSHLFNSALLLSGSKHESQFSGNVHQFTTGSPLNYRMQNPWVNQSGLYSGDHPNLLSNMLQQQLHHHSGSLSPHLLTQLRQQQHRLHHPVQQSGGYMSGFQSHLFNPQLSSGSSMVSRYEHMLGLADVREHRPKSTHKGKQSHRFSQQGSDASNQKNESGSLQFRSKYMTSDEIESILRMQLAVTHCNDPYVDDYYHQACLAKKPSAKLKHSFCPTQIKELPPRARSNTESHGFLQVDALGRVSFLAIRRPRALLEVDPSNSSISGSFERNISEKPLEQEPLFAARVTIEDGLCLLLDVEDIDRFLQSNQLQDGGTQLRRRRKVLLEGLATSLQLVDPLGKNGHKVGLGAKDDVVFLRLVSIPKGCKLLAKYLQLLVPGSELMRIVCMAIFRHLRFLFGGLPSDLTAAETASDLAKIVCQCVQGMDLGALGACLAAVVCSSEQPPLRPLGSTTGDGASRILVSVLERATELLTDPHGACSYIGNRSFWQASFDEFFGLLTMYCMNKYQSIMQSLLIQGTPNVAVIGSDAAKAISREMPVELLRASLPHTNDHQRKLLLDFAQRSVPVVGFNSYTGSSSGHVNSETVLS 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0510 888 MobiDBLite consensus disorder prediction 442 463 - -
Ssu2g0510 888 MobiDBLite consensus disorder prediction 105 162 - -
Ssu2g0510 888 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 197 867 IPR039900 GO:0000290
Ssu2g0510 888 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 15 196 IPR039900 GO:0000290
Ssu2g0510 888 MobiDBLite consensus disorder prediction 430 463 - -
Ssu2g0510 888 PANTHER PROTEIN PAT1 HOMOLOG 197 867 - -
Ssu2g0510 888 MobiDBLite consensus disorder prediction 202 222 - -
Ssu2g0510 888 MobiDBLite consensus disorder prediction 257 281 - -
Ssu2g0510 888 PANTHER PROTEIN PAT1 HOMOLOG 15 196 - -
Ssu2g0510 888 MobiDBLite consensus disorder prediction 142 162 - -
Ssu2g0510 888 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0510 Ssu-Chr2 29242941 29258622 Dispersed