Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0509 ATGGAAGACGCAAACGTGGCGACTCTAGCAGACCTCCTCCACTCCCCTCGCCCTCTCACCGCCACCGCCTCTCCCCCCTTCTCTTCGACGCCCCCGCCGCACCGCTCCACCGAACGCCGCGTCCTCACCGCCCTTCCCGGCCGAACCGTCCTCGTCGGAACCCTAATCCTCCCCACCCACTCCCCTCCCTCCTCCTCCCCTCCCTGCTCCTGCCTCCGCTTCTCTGATGCCTCTGCGACCCTCTGCTGCGACCTCCTCCACTGCCGCCCCGCCGCTCTTAACAAGGAAATCCGTGTCACCGCCTGGAACTTCGTCCCGTTCAAGCGCCACGGCCTCTTGGAGATCATCGATTGGCGCTTCTCCGACCCCAACGAAGGCTCCAGCTCCGTGGACTCGCTTCCACTGGCGCTGAATTGTGGCCGACAATCCAGCGCCAGCACGAGGAGCGTCCATGGCGTGGTGGAGTCGGTTGGCCCTGTCTCCGTGGTGCCGTGCACCATGGCGGCTAATAGCTCTGACTTGAATTCGGGCTCTAAAGTGAACTTGCCTGGGTTTTTGGTGCAATTGGTGTGTTGTGCGTGTAGGTTGTGTGGTTCCAAGGAGTTGTTAATCGACAAATTGAGTGAGAGTAGGGAGGGACACTCTTTTACCAAATTGGAGATTGTGTATTTTTGTGGCAATGCTTCCTCTTGGCACCCTGTGATCACTAAGCTGATTGGTAACCGTGTTGTGGTTTCGGGTTTGAAGAAGAAGGTGGTCTATGTGACAAAGGAGGAGTCTCGCGTGATGTATGTGACTATGGATGAGTCGGTTCTGCATGTTGGTTCTTGTTCGGAGAAATGTGTGCCGAGGTTGAAGAGTGGGGTCAAGGGGAAGGGTGAATGTGGCGGTTATACAGGCGTAGTTAAAGGTGTTTACATGCAAGGGATGGTTTTGGAGTTGGACCATGATGTGTGGCTTCTTTTAACTGATCAACTGCATACTTCGATTCATGGTTTGAGAGTTGGCTCCGTTTTATCTGTGAGAAATGTGCATTTTGTGGATCCGCAGTTTTCGtggacaaaaattattattcttggGGCCTGCATCAAGACTAGCATTATTGTGCAATCCTTCTCCCCGTTGGAAACTGTGTGTAATGTAGTTTTGCCATCTACCGGTATGCTAGGAAAGTTCATTCAGTCGTTACCATTTTCTGCAAGACTCTGGGTATTACTTCTTGTTTCAAGCTTCCGTAAAAAGTTTGCTGGTATCTTATCTGACAAGGAGATTTTGGGATCAAAACATAAAGAAGGGCTAGCTCAGATGTATGCTAGTTCACTTTTCCCTCCATCAGTGTTTCAAACTCAGCATGGTGCTTTTGTGGGGCTGTGTACACACGACTTGAATGGCTGCGGTAAAGAGCTGCATTGCGGTTTTCTgaaattgGTAATACCAATGTCTATCTTCATCTGTCACTGTATACACACGTTGCTAAGAATTCTAAAGTCAGAAAATCAGTGTAAATTATTGCCTGTTGGCAACCATTTCAGTATTTTATCACGTGAAGCCAGATATAATGGTAGATCAGTTAGGAGGATTGTTCGAAGTGAAGATGTGGGTGTTGTTTTGCTTGGATATCTAAAGATTGATCCATCGACTAGAAGACTGCGGCTGGTTGATGCAACTGGTGGCATTGATATTCTTATACCAGACCTTCCCTTAACTTGGAATCCCAACGAAATGTATGAGGTGATGGACTATGATGTTATTGTGGACGGCATAGGCGAACTTGTGGATCAGTTTGAATTGCTTGGGAGCGAGTCATTATCATGCGGAACAATCTTTAATTGCACCAAAGCAGAAAGAGAGTTATGCACATCAATTTTTGTTTACTGTCATTGGAAGAATGCTAAATGCAGAAAAATTCCCCTTTACTCATGTATCAATAGTAAGAACGAAACTGAGACACTAGAACCTGGATCCTACCATTTGCTTAGGGTATCTCACAAATTTCCTCTGCAAGAAAAGtattttaataaaacaggATCCAGCAAGTCAAGTACTTTTGTTGAAGCCATACTTTTTCCATTCATTTTATTGGTTGCTGGGAAGAGTCGAATAGCACATCCATGCAATGCTTCTTGGGGCAAGACAAAGGAACTTTTGAAATATTGTATCAGTGGCAATAATGAGGATAAAGTTTCCATTAAGAGGCAGAAACTTGTTAAGGAATCAATAAGTTCATCTAAGGATGAATTTCACACTTCCATCTACGAGCTGAGTGCTTGTTCTAATTTTTTCAGGAAAtcagaagagaaaaaaaaatgtgtcagcTTGAGATCTTCTCATGATGTATCTTGTCTGATTACTTTTAGAAGCCTTCAAAATGAGAATGTGGTTTACCCGGCTATCATGCGCTCTACATCACCTATGAAAGATATGAGTTTTAATTCAAAACCTACTTCAAGGAAAATTTTGCTTGAGTTCTCATCAGATAGATTTTTAATGCACCAGGTATCTTACTCTCTTTGGCTTGCTTACCAAGGGCAGCAGTTGTTGCAGATTGGTGGTTATTACATCATAGATCATAATAGAAAGGACTGCTTCAGTGGTACAGAAGATGCTGACTTTGGTAGCCATAGCAGTGCTAAATTACTTGTTGATTCTGGAAAACATATCTGGAgcctttcatttatttatgatgAGAATCTTTATGATTATCAATCGGAATATACATCTGCAAAAGATTCTTTATCTCCTACCATCGGAGTTTTGCCCAAAGATCAAAAACTTTTGCCGAGGTCCAATGGTGAACCTTCAGGTGTCTGTTCAGATGTTTGCCTTTATCTCCCCATCAATCTTGCAGATGTCTTGGAGGATAATATTAAGGAATTGGAAGATAGTCAAAGCTTGCAATTTGCAATATCAGTAGATAGTGCTAACCTTTCTTTAGGTACTGGGACTGTAGTGGCTAGGCGTAATTCTTGTTTTGGATCTCAGAGATCAAACAACTTGTTCCCTGAGGGCAATTTGATCTCTCTCGAGGGAAATGTGGTCGACATTCATGAAATTGGCTCTGGTTTCTTCAATTCATGCTCAAGTGGTGCAAACCTTGATGCTCTTCAGTTGAAAGGCCTCACTGGGACTAGAAGCAGTTTCTGCATTCACGTTTTAGTGCATCACCATATTgTGAATATTTTTGGTTCTGCAAATAAACATGCTTTCCCTATTGGATTTGGACCTGGTGTAACTGCAACATTTCATCGAATTCTCAATGCAAGggcacaaaataaatttatgttgctGCCTCTgtcatttattgtaataaaatcaataaaagtaTGTGATAAACAATGCAGTGACAGGTCCTCTTTTTTAAACCCTACTAAAGATGCTGACAATGCTTCTCAAGATTCTATCTCTTGCTTGATTTCTCAATTGCCTCAGAGCTTGAGCCACAAGCAAATAGTGCTTCGATGCAAGGTAGTTGCagtctttgttttatttgtagaaAGAAAGACTACAAATTTTATTgcagaaacaaaaattaatgctAAGGGGACTCTTTTGGACATTCCGCTTGCTTGTTTTTTGTTGGAAGATGGGTCATCATCATGTTGTTGCTGGGCTAATGCTGAAAGGGCAGCAACCTTGTTGAGACTACATGAAGAACTTGCCACATCTTATCATCTCCggagaattttgaaaaatcacaaAAGAATTACTTTGAAAAACCATGGATTGTATATTGATTCTCCTTACCAAGATCTTGTTGTTTCTGTTACTTCTGGTAATGCTCTTTGCAGTTCCGATGAAAACCTCCTCAAGTTGATAATATTCAACGCATGTGTCGGTAGAATATGGAATGTAGTTGCTAGTGGGATGGATGCAGAGGAAATAAGACGGTTGGAAAAAGAATACCTTACAGATATGGTGAATGTGCAAAACATGCAGAATATATGGGCCAAAGAAGTCTCTTACCCACGCACTCTGGCCGAGGCAAGGAATATGATTCGGGAACTTTTGAAAAGTTAA 4017 0.4162 MEDANVATLADLLHSPRPLTATASPPFSSTPPPHRSTERRVLTALPGRTVLVGTLILPTHSPPSSSPPCSCLRFSDASATLCCDLLHCRPAALNKEIRVTAWNFVPFKRHGLLEIIDWRFSDPNEGSSSVDSLPLALNCGRQSSASTRSVHGVVESVGPVSVVPCTMAANSSDLNSGSKVNLPGFLVQLVCCACRLCGSKELLIDKLSESREGHSFTKLEIVYFCGNASSWHPVITKLIGNRVVVSGLKKKVVYVTKEESRVMYVTMDESVLHVGSCSEKCVPRLKSGVKGKGECGGYTGVVKGVYMQGMVLELDHDVWLLLTDQLHTSIHGLRVGSVLSVRNVHFVDPQFSWTKIIILGACIKTSIIVQSFSPLETVCNVVLPSTGMLGKFIQSLPFSARLWVLLLVSSFRKKFAGILSDKEILGSKHKEGLAQMYASSLFPPSVFQTQHGAFVGLCTHDLNGCGKELHCGFLKLVIPMSIFICHCIHTLLRILKSENQCKLLPVGNHFSILSREARYNGRSVRRIVRSEDVGVVLLGYLKIDPSTRRLRLVDATGGIDILIPDLPLTWNPNEMYEVMDYDVIVDGIGELVDQFELLGSESLSCGTIFNCTKAERELCTSIFVYCHWKNAKCRKIPLYSCINSKNETETLEPGSYHLLRVSHKFPLQEKYFNKTGSSKSSTFVEAILFPFILLVAGKSRIAHPCNASWGKTKELLKYCISGNNEDKVSIKRQKLVKESISSSKDEFHTSIYELSACSNFFRKSEEKKKCVSLRSSHDVSCLITFRSLQNENVVYPAIMRSTSPMKDMSFNSKPTSRKILLEFSSDRFLMHQVSYSLWLAYQGQQLLQIGGYYIIDHNRKDCFSGTEDADFGSHSSAKLLVDSGKHIWSLSFIYDENLYDYQSEYTSAKDSLSPTIGVLPKDQKLLPRSNGEPSGVCSDVCLYLPINLADVLEDNIKELEDSQSLQFAISVDSANLSLGTGTVVARRNSCFGSQRSNNLFPEGNLISLEGNVVDIHEIGSGFFNSCSSGANLDALQLKGLTGTRSSFCIHVLVHHHIVNIFGSANKHAFPIGFGPGVTATFHRILNARAQNKFMLLPLSFIVIKSIKVCDKQCSDRSSFLNPTKDADNASQDSISCLISQLPQSLSHKQIVLRCKVVAVFVLFVERKTTNFIAETKINAKGTLLDIPLACFLLEDGSSSCCCWANAERAATLLRLHEELATSYHLRRILKNHKRITLKNHGLYIDSPYQDLVVSVTSGNALCSSDENLLKLIIFNACVGRIWNVVASGMDAEEIRRLEKEYLTDMVNVQNMQNIWAKEVSYPRTLAEARNMIRELLKS 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0509 1338 Pfam CST, telomere maintenance, complex subunit CTC1 49 337 IPR028262 GO:0000723
Ssu2g0509 1338 PANTHER CST COMPLEX SUBUNIT CTC1 1 1337 IPR042617 -
Ssu2g0509 1338 MobiDBLite consensus disorder prediction 17 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0509 Ssu-Chr2 29220187 29231919 Dispersed