Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0505 ATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATATGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAACGAAATACCTTGGTTACTGGTGGTGTGCGGGGGACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGCAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAAATTCTGACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAGGTGGGATtgtaaataatacattaaggcCAACCATCCCTAGTAACTGTGATCCCGAATGGAGAACATTAATGGAACAATGTTGGGCACCCAATCCTGCAGCCAGACCATCCTTCACAGAAATTGCCAGTCGTTTGCGCATAATGTCTGCAGCAGCTAGCCAAACCAAAACACAGGGCCATAAAGCGTCTAAATGA 501 0.4132 MEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSNCDPEWRTLMEQCWAPNPAARPSFTEIASRLRIMSAAASQTKTQGHKASK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0505 166 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0505 166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 9 21 IPR008271 GO:0004672|GO:0006468
Ssu2g0505 166 SUPERFAMILY Protein kinase-like (PK-like) 1 147 IPR011009 -
Ssu2g0505 166 Gene3D Transferase(Phosphotransferase) domain 1 1 166 - -
Ssu2g0505 166 SMART serkin_6 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0505 166 PANTHER SERINE-THREONINE PROTEIN KINASE 1 166 - -
Ssu2g0505 166 Pfam Protein tyrosine and serine/threonine kinase 1 147 IPR001245 GO:0004672|GO:0006468
Ssu2g0505 166 PRINTS Tyrosine kinase catalytic domain signature 3 21 IPR001245 GO:0004672|GO:0006468
Ssu2g0505 166 PRINTS Tyrosine kinase catalytic domain signature 74 96 IPR001245 GO:0004672|GO:0006468
Ssu2g0505 166 PRINTS Tyrosine kinase catalytic domain signature 118 140 IPR001245 GO:0004672|GO:0006468
Ssu2g0505 166 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0505 Ssu-Chr2 28921251 28924935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0505 1 166 MAP Kinase Kinase Kinase AT1G16270 88.095 1.53e-102 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ssu2g0505 PK_Tyr_Ser-Thr 3.9e-38 CL0016