Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0492 ATGGCAGAAGAGGTGGTTTTGTTGGATTTTCATCCCAGTATGTTTGGTATGAGAGTTAGGATTGCACTGGCAGAAAAAGGGGTTAAGTATGTACACAAAGAAGAAAACTTGAGGAACAAGAGTCCTCTGCTTCTGCAAAGCAACCCCATTCACAAGAAAATCCCAGTTCTAATCCACAATGGGAAACCCATTTGTGAGTCCCTCAATATTGTTCAATATATTGATGAGTTTTGGACAGATAAAGCTCCATTGTTGCCCTCTGATCCATACCAGAGAGCTGAAGCCAGGTTCTGGGCTGATTTTATTGATAAGAAGGTGGATGAAGCTGGGAAGGGGATATGGGCCTCAAAGGTAGATCAGCATGAGATGGCCAAGAAGGAATTGAAAGAGAGCTTGAAGAAGCTGGAGGAGGTTCTTGGGGACAAGCCATATTTTGGGGGTGACAAATTTGGGTTTCTTGATGTTGCTTTGATTCCCTTCCATCAATGGTTTTTTTCTTATGAGACAGTGGGTAGCTTCAAATTGGACTGTCCCAAACTCACAGCATGGGCCAAGAGATGTGTGGAGAGGGAAAGCGTGTCCAAATCCCTTGCTAGTGAAAAGTACATCTATGAGTTTGTTTTGGGCCACAGAAAAGTATCTGAGTTGGACTAG 654 0.4343 MAEEVVLLDFHPSMFGMRVRIALAEKGVKYVHKEENLRNKSPLLLQSNPIHKKIPVLIHNGKPICESLNIVQYIDEFWTDKAPLLPSDPYQRAEARFWADFIDKKVDEAGKGIWASKVDQHEMAKKELKESLKKLEEVLGDKPYFGGDKFGFLDVALIPFHQWFFSYETVGSFKLDCPKLTAWAKRCVERESVSKSLASEKYIYEFVLGHRKVSELD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0492 217 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Ssu2g0492 217 SUPERFAMILY GST C-terminal domain-like 76 211 IPR036282 -
Ssu2g0492 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Ssu2g0492 217 Coils Coil 118 138 - -
Ssu2g0492 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Ssu2g0492 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 -
Ssu2g0492 217 CDD GST_N_Tau 5 78 - -
Ssu2g0492 217 Gene3D Glutaredoxin 1 87 - -
Ssu2g0492 217 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Ssu2g0492 217 Gene3D - 88 217 - -
Ssu2g0492 217 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Ssu2g0492 217 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 210 - -
Ssu2g0492 217 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Ssu2g0492 217 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Ssu2g0492 217 Pfam Glutathione S-transferase, C-terminal domain 121 191 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0492 Ssu-Chr2 28465689 28467239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0492 1 212 Glutathione S-transferase Gene Family AT1G17180 62.617 9.96e-97 279