Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0460 ATGGCGAGAAAGGCTGTTCTGATCGGAATCAACTACCCGGGAACGAAGGCAGAGCTGAGAGGGTGCGTAAACGACGTGTGGAGGATGCACCGGTGTCTGATCGAGCGATACGGGTTCTCGGAAGACGACATCACCGTTTTGATCGACACGGACCGGTCGTACACGGAGCCAACGGGGAAGAACATTCGGTCAGCGTTGACCAGGCTGATACGATCGGCGAGGCCGGGGGACGTGCTGTTCGTGCACTACAGCGGACACGGCACGCGCCTCCCTGCGGAAACCGGAGAGGAGGATGACACTGGATATGATGAATGCATTGTTCCTTCCGATATGAACCTCATCACTGATGATGATTTCAGGGAATTTGTAGATAGGGTCCCTAGAGATTGTAAGCTCACGATAGTATCGGATTCCTGCCATAGTGGTGGCCTAATTGAAGGAGCTAAGGAGCAGATCGGAGAGAGTACGAAGGGAGAAGCGCACCATTCAGGCTCTGGTTTTGGATTGTCCAGTTTTCTACGTCAGACTGTGGAAGATGCCATTGAGTCTCGTGGAATTCATATCCCTTCAGCATTGCGCCATCATGCACCCAAGCATGACGTTGAAGCTAATGATAGGGACATTGCACTTCCACATGAGCACTACGCCTATGTAAAGAATAGATCATTGCCACTATCTACCATCATAGATATACTCAAGCAGAAAACTGGGAAAAATGATATAGACATTGGGAAACTGAGACTTACACTCTACGATATTTTTGGGGAAGATGCTAGCCCTAAAGTAAAGAAGTTCATGAAGGTTATCTTAAATAAACTCCAACATGGGGATGGTGGAAGTGAAAAACATGGTGGATTCTTGGGGTTGGTGGGTAGTCTTGCTCAAGAGTTTCTCAAGCAAAAGCTGGATGCAAACGATGATGGGTATGCAAAACCTGCGATGGAGACACAGGTAGCAAGTAAATATGAGGCATATGCTGGATCAACCAAGCCCCGCCTTCCAGATGGTGGAATTCTGATGAGCGGTTGTCAGACTGACCAAACTTCTGCAGATGCAAGTCCTTCAGGAAATTCTACCAGTGCTTATGGAGCTTTTAGCAATGCAATACAGGCTATAATTGAGGAGAGTAATGGTGCAGTCACAAATCAAGAGCTTGTTTTGAAGGCAACAGAGAAGCTGAAGAGAGGAGGTTTCACCCAACGACCAGGACTCTATTGCAGTGATCAACATATTGATGGTTCTTTCGTGCGTTGA 1254 0.4777 MARKAVLIGINYPGTKAELRGCVNDVWRMHRCLIERYGFSEDDITVLIDTDRSYTEPTGKNIRSALTRLIRSARPGDVLFVHYSGHGTRLPAETGEEDDTGYDECIVPSDMNLITDDDFREFVDRVPRDCKLTIVSDSCHSGGLIEGAKEQIGESTKGEAHHSGSGFGLSSFLRQTVEDAIESRGIHIPSALRHHAPKHDVEANDRDIALPHEHYAYVKNRSLPLSTIIDILKQKTGKNDIDIGKLRLTLYDIFGEDASPKVKKFMKVILNKLQHGDGGSEKHGGFLGLVGSLAQEFLKQKLDANDDGYAKPAMETQVASKYEAYAGSTKPRLPDGGILMSGCQTDQTSADASPSGNSTSAYGAFSNAIQAIIEESNGAVTNQELVLKATEKLKRGGFTQRPGLYCSDQHIDGSFVR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0460 417 Gene3D - 307 415 - -
Ssu2g0460 417 Gene3D - 1 179 - -
Ssu2g0460 417 Pfam Caspase domain 3 409 - -
Ssu2g0460 417 PANTHER METACASPASE-5 1 416 - -
Ssu2g0460 417 SUPERFAMILY Caspase-like 3 134 IPR029030 -
Ssu2g0460 417 PANTHER METACASPASE-4 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0460 Ssu-Chr2 26493551 26495672 Tandem