Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0452 ATGAAGTACTTGTTGGTGACAGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCAAGCAGTATTGGGGTGCTACTTAAGGCCTGTGGCTTTCGGGTTACTTCTATCAAGATtgATCCCTATCTGAACACTGATGCGGGGACAATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTTTTGGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTAACTCGCGACAATAATATCACAACTGGAAAAATATATCAGTCTGTTATTGAAAAGGAGAGAAGAGGAGATTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATTACTGATGCCATCCAAGAATGGATAGAGCGTGTAGCACAGATACCAGTTGATGGAAAAGAAGGCCCAGCTGATGTTTGTGTCATTGAGTTGGGTGGAACTATtgGGGATATCGAGTCCATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGTAACTTCTGTTTAGTTCATGTCAGCTTGGTGCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTCCGCCAACTTAGGGGGTTAGGGTTGACCCCAAATCTTCTTGCATGTCGCAGTTCAAAGGAACTTGATGACAACGTTAAGGAAAAACTTTCTCAATTTTGTCATGTTCcgTCATCAAACATACTTACTCTCTTTGATGTTCCAAATATTTGGCACATTCCTTTGCTACTAAGAGACCAGAAGGCGCATGAAGCAATCCTGAAAACATTAAACCTGCTAGGTGTTGCTACAGAGCCTAATTTTAAGGAGTGGATTGCAACAACAAAAGTATATGACAAATTTCATGAATCTGTTAGAATTGCAATGGTGGGAAAATATACTAACCTTTCAGATGCATATCTTTCTGTGTTGAAGGCACTTTTGCATGCTTCGGTTGCTTGCAATCGTAAGCTTGTTGTGGACTCGGTTCCTGCTGAAAATCTTGAAGATGATGCCTCTAAAGAGAATCCTGAAGCATATAAAGCTGCTTGGGGTCTTTTGAAGGGTGCTAATGGGATTCTAGTTCCAGGAGGTTTTGGTGACAGGGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAAAATAGTGTTCCATTTCTGGGCATTTGCTTAGGGATGCAAATTGCTGTCATTGAGTTTTCAAGATCTGTTCTGGGTCTTCATGATGCCAATAGCACAGAATTTGATCCCAAAACTGAAAACCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTCCACACTGCTGACTGCAAATCGGCCAAGTTGTATGGTAATGCAAGCTTTGTTGATGAGCGACATCGGCATAGATATGAGGTAAATTGTGTTTGCATGCTGAAGCTTCCCTTATGTGAAAGATGCAACATTGATCATGTACAATAA 1512 0.42 MKYLLVTGGVVSGLGKGVTASSIGVLLKACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKEKLSQFCHVPSSNILTLFDVPNIWHIPLLLRDQKAHEAILKTLNLLGVATEPNFKEWIATTKVYDKFHESVRIAMVGKYTNLSDAYLSVLKALLHASVACNRKLVVDSVPAENLEDDASKENPEAYKAAWGLLKGANGILVPGGFGDRGVQGKILAAKYARENSVPFLGICLGMQIAVIEFSRSVLGLHDANSTEFDPKTENPCVIFMPEGSKTHMGGTMRLGSRRTYFHTADCKSAKLYGNASFVDERHRHRYEVNCVCMLKLPLCERCNIDHVQ 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0452 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Ssu2g0452 503 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 503 - -
Ssu2g0452 503 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Ssu2g0452 503 CDD GATase1_CTP_Synthase 298 484 IPR033828 GO:0003883|GO:0006241
Ssu2g0452 503 SUPERFAMILY Class I glutamine amidotransferase-like 297 487 IPR029062 -
Ssu2g0452 503 TIGRFAM PyrG: CTP synthase 1 486 IPR004468 GO:0003883|GO:0006221
Ssu2g0452 503 Gene3D - 294 491 IPR029062 -
Ssu2g0452 503 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Ssu2g0452 503 Gene3D - 1 292 IPR027417 -
Ssu2g0452 503 PANTHER CTP SYNTHASE 1 486 - -
Ssu2g0452 503 PANTHER CTP SYNTHASE 1 486 IPR004468 GO:0003883|GO:0006221
Ssu2g0452 503 Pfam Glutamine amidotransferase class-I 309 484 IPR017926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0452 Ssu-Chr2 26313617 26319037 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1581 8 34199683 34207046 Ssu2g0452 2 26313617 26319037 PCT
Ssu2g0452 2 26313617 26319037 Ssu8g1522 8 31660459 31670745 PCT