Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0451 ATGAGCTACCACAACACAAAAGCCCTGGCACACTTCATGTTGCTAACAACAATGATAGTAGGCATTGCAGTGGGAGATTTATCCAAGGACAAAGAGGAATGCACACAACAATTGGCAGGGCTAGCAACTTGCCTGCCCTATGTTGGGGGTCAAGCACAAGCTCCAACCCCAGATTGTTGTAGCGGTCTCAAGCAAGTGCTCAAGAATAACAAAAAGTGTTTGTGTGTTATTATCAAAGATCGCAATGATCCTGACCTGGGTGGTTTACAGATTAATGTGACTTTGGCTTTGAACCTGCCAACAGCTTGCAATGCCCCTGTCAATGTGTCCAAGTGTCCCGAGCTGCTGCACATGGATCCCAAATCACCAGAGGCTCAAGTTTTTTATCAACTGGAGAAAGGCTCCAGCAAAAATGGCACAGGTCCTGCACCAAGTCCTTCTGATGCAGTTGGAGCAAGTCCTTCAAGCAGCCAGGCAGCCAGTAGCTCACAGAAGAATGATGCATTCTGCAAGGAGAAGATATTGTTTGGGCTACATGTTTGGGTTGCTGCTGGGCTTCTAGTTTGGGCTTTTATTGGGCTCTTCTGCTAG 591 0.4721 MSYHNTKALAHFMLLTTMIVGIAVGDLSKDKEECTQQLAGLATCLPYVGGQAQAPTPDCCSGLKQVLKNNKKCLCVIIKDRNDPDLGGLQINVTLALNLPTACNAPVNVSKCPELLHMDPKSPEAQVFYQLEKGSSKNGTGPAPSPSDAVGASPSSSQAASSSQKNDAFCKEKILFGLHVWVAAGLLVWAFIGLFC 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0451 196 Gene3D - 31 112 IPR036312 -
Ssu2g0451 196 SMART aai_6 34 112 IPR016140 -
Ssu2g0451 196 PRINTS Plant phospholipid transfer protein signature 33 49 IPR000528 GO:0006869|GO:0008289
Ssu2g0451 196 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Ssu2g0451 196 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Ssu2g0451 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
Ssu2g0451 196 CDD AAI_LTSS 41 104 - -
Ssu2g0451 196 Pfam Probable lipid transfer 19 112 IPR016140 -
Ssu2g0451 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 11 181 IPR043325 -
Ssu2g0451 196 PANTHER PROTEIN YLS3 11 181 - -
Ssu2g0451 196 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0451 Ssu-Chr2 26245919 26247245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0451 26 192 Acyl Lipid Metabolism Gene Families AT2G44300 55.932 6.99e-62 189