Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0423 ATGGCTTCTAGGCCGAGAACGCCAATTTTCCGTCCACAACTTTCAATGCGTCGCGTGTACGAAACTTTGCAGCCACCATCAGAGACAAAAGAAGTCCCAGAAGCTTACCTTCTGCATGTTTATCTTCCTGGTTTTCCAAGGAACagtgttaaaattacatatgtgGCCTCTGCACGGACGGTGAGGGTTTCAGGAGAAAGACAAATTCAAGGTAACAGATGGATCCGATTTGACCAATCATATCCTGTTCCTGATTATTGTGAGCCAGAGGCAGTTCAGGGCAAGTTTGAATCTTCAATTCTCATCCTTACAATGCCAAAGAAGGCCACTTCACAAGCTGCTCCTAAACAACAAGAAGTGGGAACAACTCAAGAGAAAGGTGTAGTAGCTGAAGCAAAGCCTGATGAAAAAGGCCAAGAGACCCTTCCACCACAACCTACAACTACTAAAGTGGAAGAACCAATTGAAGACAAGAAAAGTGTTTCACCACCAAGCCCTGACGTAAAGGCACAAGAAAAGACTACCTTTGAAGACACACCATCTCAAACCCCATCAGAACCAATTAAGGGTCAAGAGGAAGCTGTAGAAAGAGTTGCTCCTGCAGGAACAGGTGAGCCTCAACTGGGTGAAAAGGAGTTGGAGACAAAACCAGCACCAACAAGGGCAACCACAATGCAAACAGATGAAAAGCCTCAAAAGGGCCAAGAGGAGGTTGAGTCAAAACCAGCACCAACAAGGGCAACCACAATGCAAACAGATGAAAAGCCTCAAAAGGGCCAAGAGGAGGTTGAGTCAAAACCAACACCAACAAGGGCAACCACAATGCAAACAGATGAAAAGCCTCAAAAGGATCAAGAGGAGGTTGAGTCCAAATCAACACCAACAATGTTAACCAAAATCGAAACAGCTGAAAGGCCCCAGATGGGTCAAGATGAATTTGAACCAATACTAACACCAACAATGATAACCAAAGTCAGAATAGCTGAAAAGCGCCAGAAGGGTCAAGAGGAATTTGAACCAAAATCAGCACCAACAATGGCACCAAATATCACAACAGATGAGCAACCAGCAAAGGGTCAAGAGAAAGGTGAGCCAAAACCTGCAATAACTAATGTTACCAGAAATTTAACAGTTAAAGAGCAAATGGAGGAAAAGAAGACTGAGGAAACAATAGCTGAAGATGCAGAGAAGGAAAGGGTCTCAAAGAAGGAAGTTAAAGAGGAACATTCTGAGTCAAGAAAGCCTGGAAAAGATAAGGAGCAGGGtgattttgaagagaaagaaacCAAGACTGAAAAATTGTTAGCCAAGGAAGCAAAACCTTCTGCTCCaaagaaggaaaaggagaaggaaTCCAGCAGCAGAACTACCCctaaaaagaaagggaagagtGAAGAGAATGCAAAGGAAAAGGCTTGTTCTGCTTGCCAGGTTATCACAAAAATAGCAGAAGGGATATGGaatgaggaagagaaaaaattagCAGTAAATATTGGTGCTGCAGTTCTGGTGATTGCTGCATTGGGAGCTTATGTGTCCTATAGGTTTGCCTCTGGAGGGAGAACCTAA 1569 0.4149 MASRPRTPIFRPQLSMRRVYETLQPPSETKEVPEAYLLHVYLPGFPRNSVKITYVASARTVRVSGERQIQGNRWIRFDQSYPVPDYCEPEAVQGKFESSILILTMPKKATSQAAPKQQEVGTTQEKGVVAEAKPDEKGQETLPPQPTTTKVEEPIEDKKSVSPPSPDVKAQEKTTFEDTPSQTPSEPIKGQEEAVERVAPAGTGEPQLGEKELETKPAPTRATTMQTDEKPQKGQEEVESKPAPTRATTMQTDEKPQKGQEEVESKPTPTRATTMQTDEKPQKDQEEVESKSTPTMLTKIETAERPQMGQDEFEPILTPTMITKVRIAEKRQKGQEEFEPKSAPTMAPNITTDEQPAKGQEKGEPKPAITNVTRNLTVKEQMEEKKTEETIAEDAEKERVSKKEVKEEHSESRKPGKDKEQGDFEEKETKTEKLLAKEAKPSAPKKEKEKESSSRTTPKKKGKSEENAKEKACSACQVITKIAEGIWNEEEKKLAVNIGAAVLVIAALGAYVSYRFASGGRT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0423 522 Gene3D - 10 113 IPR008978 -
Ssu2g0423 522 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 18 123 IPR002068 -
Ssu2g0423 522 PANTHER HEAT SHOCK PROTEIN 26 2 287 IPR045045 -
Ssu2g0423 522 MobiDBLite consensus disorder prediction 111 470 - -
Ssu2g0423 522 PANTHER HEAT SHOCK PROTEIN 26 304 521 IPR045045 -
Ssu2g0423 522 Pfam Hsp20/alpha crystallin family 29 116 IPR002068 -
Ssu2g0423 522 MobiDBLite consensus disorder prediction 378 470 - -
Ssu2g0423 522 CDD ACD_sHsps-like 30 107 - -
Ssu2g0423 522 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 304 521 - -
Ssu2g0423 522 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 2 287 - -
Ssu2g0423 522 SUPERFAMILY HSP20-like chaperones 17 112 IPR008978 -
Ssu2g0423 522 Coils Coil 378 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0423 Ssu-Chr2 24842184 24844645 Dispersed/Wgd