Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0414 ATGGATGTGGAGTGGTCTGATTCGCGGTACGATGGTAGAAATGATAAGGAGGATTCGCCAGCAAGGGAGCAATATGATGATGATGGGGCAGAGAAATCTAGCAAGCATAGAAGCAAGGATAGGAAGAAGAGTGAGAAGGAGCACCGCCGTGAACAGCTGAAGGATGCTTCAAAAGAGGGAAGGGAACGGAAGAAGGAAGATAGGGATGAGCGCGAGAAGGACCGGGGTAAAGATAAGCTGAGGGAGAAGGATTATGATAGGGAGAAATATAGGGAGAAGGAGCGCGAGAGGGATAGAGATAAGAAGGACCGGAGTAAGGATAAAGAGCGTGAGAAGGAGAGAGAGGTGGAGAAAGATGGTGATAGAGCACGAGAGAAGGAGAGGGGTAAAGAGAAGAGTAGGGATAGGGATAGGGAAAGGGAGAAAGAAAGGGATAAAGTGAAGGAAAGGGAGCGGGAGAagtatagagaaagagagaaggagaggGAAAGCTATAGAGATGGGGACAAGGATAagggaaaagataaaattagagaaaaggaGAGGGAGACAGATCGAGATAAAGAAAGGACGAGAGATAGAGTGAGCAGAAAGACTCATGAGGAAGATTATGAACCAAATAATGTTGATGATAATGTAGACTACCATGACAAGAGAGATGAGGGGGTTGGCAAGCAGGCAAAGGATTCAAAGTTTGATGAAGATAATCAAGATGGCCAAACACCAGCACATCTGTCATCAACAAAACTTGAAGAACGCATCTTGAAgATGAAAGAAGCAAGGACGAAGAAACAAACTGAAGCTGATTCTGAGATCTCAGCATGGGTTAATAAAAGCCGCAAGCTAGAAAAGGAAAGAGCAATGCAGCTCTCAAAGATTTTTGAGGAGCAgGACAACATTGCAGTAGAGGGAAGTGACGATGAGGATACAGCCCAACACACTGATAACCTGGCGGGGGTGAAAGTTCTTCATGGCCTTGATAAAGTTATGGAAGGCGGCACAGTAGTACTAACTATTAAAGATCAGCCTGTACTTGCTGATGGTGATGTTAATGAAGATGTTGATATGCTTGAGAATGTGGAAATTGGAGAACAGAAACGACGAGATGAGGCTTATAAAGCTGCAAAAAAGAAAACTGGCATATATGATGATAAGTTCAATGATGACCCCTCCTTGGAGAAGAAAATACTTCCACAGTATGATGATCCAGCTGCAGAAGAGGGTTTAACTTTGGATGAAAAGGGACGATTCTCAGGTGAAGCTGAGAAGAAACTCGAAGAGCTGCGAAGAAGGTTAACTGGTGTTTCCACGAATACCTTTGAAGATCTAACTTCGTCTGGAAAGGTATCATCAGATTACTATACTCACGAAGAAATGCTAAAATTTAAGAAgcccaagaagaaaaaatcCTTGCGGAAGAAAGATAAGCTGGACATCAATGCCCTTGAAGCTGAAGCTGTCTCTTCTGGATTGGGTGTTGGTGACCTTGGTTCTCGGAAAGATGTAAGTAGGCAAGCCATCAAAGATGAGCAAGAAAGATTGGAGGCTGAGATGAGAAATAATGCTTACCAGTCTGCTTATGCTAAAGCAGACGAAGCCTCCAAATTGCTGCGTATGGAACTAACTCAAAATGTTAAAACAGAGGAAGATGAAACTCCAGTTTTTGTAGATGATGATGAGGATCTTCGTAAATCCTTAGAGAAAGTGAGAAGATTAGCTCTTAAAAAGCAGGAGGAAGAAGGGGCATCTGGCCCTCAAGCTATTGCGTTGCTTGCCACCCTCAAATCATAA 1791 0.4182 MDVEWSDSRYDGRNDKEDSPAREQYDDDGAEKSSKHRSKDRKKSEKEHRREQLKDASKEGRERKKEDRDEREKDRGKDKLREKDYDREKYREKERERDRDKKDRSKDKEREKEREVEKDGDRAREKERGKEKSRDRDREREKERDKVKEREREKYREREKERESYRDGDKDKGKDKIREKERETDRDKERTRDRVSRKTHEEDYEPNNVDDNVDYHDKRDEGVGKQAKDSKFDEDNQDGQTPAHLSSTKLEERILKMKEARTKKQTEADSEISAWVNKSRKLEKERAMQLSKIFEEQDNIAVEGSDDEDTAQHTDNLAGVKVLHGLDKVMEGGTVVLTIKDQPVLADGDVNEDVDMLENVEIGEQKRRDEAYKAAKKKTGIYDDKFNDDPSLEKKILPQYDDPAAEEGLTLDEKGRFSGEAEKKLEELRRRLTGVSTNTFEDLTSSGKVSSDYYTHEEMLKFKKPKKKKSLRKKDKLDINALEAEAVSSGLGVGDLGSRKDVSRQAIKDEQERLEAEMRNNAYQSAYAKADEASKLLRMELTQNVKTEEDETPVFVDDDEDLRKSLEKVRRLALKKQEEEGASGPQAIALLATLKS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0414 596 MobiDBLite consensus disorder prediction 1 238 - -
Ssu2g0414 596 Coils Coil 39 59 - -
Ssu2g0414 596 Coils Coil 106 126 - -
Ssu2g0414 596 Coils Coil 138 158 - -
Ssu2g0414 596 MobiDBLite consensus disorder prediction 1 251 - -
Ssu2g0414 596 Coils Coil 418 438 - -
Ssu2g0414 596 PANTHER SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES 136 594 IPR005011 GO:0000398
Ssu2g0414 596 Pfam SART-1 family 264 579 IPR005011 GO:0000398
Ssu2g0414 596 PANTHER U4/U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 1 136 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0414 Ssu-Chr2 24500081 24507617 Dispersed