Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0407 ATGATTAGAAACGTTCCTGTTGGGGCTGGTAAGCGTAAGAATAAGCACTTGGCTTTGCAGTATTGTCAGATACCTATGACTCCTGATGCTGCATCTGTCATCTGGACAGATTCCATACCTGCTAGTGATATGCTTCTCTCATCTAACAGACTTATCAAAGGAATGGAGAACATCCCAAGTCTCGGGGAGGAAGCTCCTCTTAGTGAGTCCTTAGAAACTGTGTTAAGTCTCAAGGGCCAGACAAAAGTTGAAGTGGACTCTTCCACTCTCAAAGATGATGGTGAGGAGCCTTCCAGCTCTTCTATGAGATCTAATGAAATAGAGCAGGTTGGTTTGACACAACACTCTAATGGTTTGATTCCTTTACATTCATTTCATTGTTATCCTGTTCCCTCATGGGCTTACCAATGGAATCCATGTTGGAATGTCATGGCAGTTAGGCCAGATAGTATAAGTTCTATACCTGGTTACCCGGGTTCTGCAACCACGAAGGCAGTTCCTGGCTTCTCCATACCAACATTAAAGTTACCACCGGCACCTTATACGGATTGTGGTTTCATGTCAAGCTTGGCTGGCCAAAAGGAAGAGGCTTCGTTGGTTGGATCTGCATTTAGTGGCATCACATTGCCTTCATCTTCAGTTAGCAACATTACTTGTTCTGGTAATAGGTCCCCAACCTTAGGAAAACATTCTAGAGATGGAAGTACGCCGGGGGAAGATGCAATGAAACAGAATCTTTGGGTACCTAAGACTGTAAGAATTAATGACTCAGAAGAGGCTGCAAATAGTTCATTATGGTCAACTTTGGGGACAAAGTCTGAACAGAACAAACTCATTATGAAAGGAAGTgtttttaaatcatttgaaCCTAAGTCAAGTGCCAGTCCTCATATTTTAGATGATAATCAAATTCTAAGGGCAAACCCTGCTGCTTTCTCGCACTCTCAATCTTTTCAGGAAAGCATGTGA 969 0.4231 MIRNVPVGAGKRKNKHLALQYCQIPMTPDAASVIWTDSIPASDMLLSSNRLIKGMENIPSLGEEAPLSESLETVLSLKGQTKVEVDSSTLKDDGEEPSSSSMRSNEIEQVGLTQHSNGLIPLHSFHCYPVPSWAYQWNPCWNVMAVRPDSISSIPGYPGSATTKAVPGFSIPTLKLPPAPYTDCGFMSSLAGQKEEASLVGSAFSGITLPSSSVSNITCSGNRSPTLGKHSRDGSTPGEDAMKQNLWVPKTVRINDSEEAANSSLWSTLGTKSEQNKLIMKGSVFKSFEPKSSASPHILDDNQILRANPAAFSHSQSFQESM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0407 322 PANTHER CYCLIC DOF FACTOR 2 2 322 IPR045174 GO:0003700|GO:0006355
Ssu2g0407 322 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 2 322 - -
Ssu2g0407 322 MobiDBLite consensus disorder prediction 220 241 - -
Ssu2g0407 322 MobiDBLite consensus disorder prediction 85 99 - -
Ssu2g0407 322 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0407 Ssu-Chr2 24308864 24309832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0407 2 321 C2C2-Dof Transcription Factor Family AT5G39660 30.882 4.32e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0407 - - gmx:102664782 497.664