Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0391 ATGCCAGTGCTACTGCCTTCACCAGCAATGTCCCTCCCTGGTGGTCACCAGTTGCCATCAGCAATGCCGACTGCAACTGAAATTGCATGTTATGGTTCTGCAACGATTGAAAATAACCTCAACCCTGAATTGCTAGGTGGCGTAGTTGCTCTTGTCGCCGTTGGCTTTACGGCGGCTTATATTTACTATCGCACAAAAAACCCCAAAGGAAGCTTGGACcccaaaaatttcaaagaatttaaacTCATAAAGAAGACTCAGCTCAGCCACGAcgttgcaagatttagatttgCCCTTCCTACTCCTTCTTCGGTATTGGGCCTTCCTGTTGGAAACCACATTCTTGTTAGCAGGGGGAAAGATAGCCAAGGAGAGGAAATTGTGAGACCATACATGCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAGATGTACCCAAATAGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGTGATTACTTGGCCGTGAAGGGCCCCAAGGGACGTTTCAGCTACAAACCTGGCCAAGTTAGGGCAATTGGAATGCTTGCTGGAGGCTCAGGCATAACTCCAATGTTTCAGCTCATAAGAGCCATTCTAGAAAACCCGAAGGACAAAACAAAGGTGCACCTCATTTACGCCAATGAAACAGTAGACGACATTCTGTTAAAGGAAGAACTAGATAACATCGCGAACAAATTTCCTCACAGATTTGAAGTCTATTATGTTCTTAATAAGCCTCCTGATCAATGGAATGGTGGCATTGGGTTTGTATCGAAGGAGATAATTAAATCACATTGTCCTGAACCAGCCCCAGATATTCAGATACTTAGGTGCGGTCCACCACCTATGAATAAAGCCATGGCTGCTCACCTTGACGCACTTGGCTACACATCAAGCATGCAGTTCGAGTTCTAA 939 0.4334 MPVLLPSPAMSLPGGHQLPSAMPTATEIACYGSATIENNLNPELLGGVVALVAVGFTAAYIYYRTKNPKGSLDPKNFKEFKLIKKTQLSHDVARFRFALPTPSSVLGLPVGNHILVSRGKDSQGEEIVRPYMPITLDSDIGYFELVVKMYPNRKMSHHFRQMKEGDYLAVKGPKGRFSYKPGQVRAIGMLAGGSGITPMFQLIRAILENPKDKTKVHLIYANETVDDILLKEELDNIANKFPHRFEVYYVLNKPPDQWNGGIGFVSKEIIKSHCPEPAPDIQILRCGPPPMNKAMAAHLDALGYTSSMQFEF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0391 312 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 168 306 IPR039261 -
Ssu2g0391 312 Pfam Oxidoreductase NAD-binding domain 189 295 IPR001433 GO:0016491
Ssu2g0391 312 PANTHER NADH-CYTOCHROME B5 REDUCTASE 40 312 - -
Ssu2g0391 312 CDD cyt_b5_reduct_like 80 312 - -
Ssu2g0391 312 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 188 207 IPR001709 GO:0016491
Ssu2g0391 312 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 282 290 IPR001709 GO:0016491
Ssu2g0391 312 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 226 237 IPR001709 GO:0016491
Ssu2g0391 312 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 214 223 IPR001709 GO:0016491
Ssu2g0391 312 SUPERFAMILY Riboflavin synthase domain-like 71 181 IPR017938 -
Ssu2g0391 312 Gene3D Translation factors 70 168 - -
Ssu2g0391 312 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 75 180 IPR017927 GO:0016491
Ssu2g0391 312 Gene3D - 169 312 IPR039261 -
Ssu2g0391 312 PRINTS Cytochrome B5 reductase signature 106 117 - -
Ssu2g0391 312 PRINTS Cytochrome B5 reductase signature 129 136 - -
Ssu2g0391 312 PRINTS Cytochrome B5 reductase signature 188 207 - -
Ssu2g0391 312 PRINTS Cytochrome B5 reductase signature 282 290 - -
Ssu2g0391 312 PRINTS Cytochrome B5 reductase signature 165 179 - -
Ssu2g0391 312 PRINTS Cytochrome B5 reductase signature 226 237 - -
Ssu2g0391 312 PANTHER NADH-CYTOCHROME B5 REDUCTASE 40 312 IPR001834 GO:0016491
Ssu2g0391 312 Pfam Oxidoreductase FAD-binding domain 80 179 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0391 Ssu-Chr2 23546027 23555084 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0391 60 312 NADPH P450 reductases AT5G17770 68.775 2.28e-135 383