Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0353 ATGTCTTGTGGTGAAGCAATTCAAAATTTCAGaGTTTTTGCAGCAACATGGAATGTAGGAGGGCAATGCCCCGCTGGGAACCTTGATCTGAGTGATTTTCTTCAGGTTCGAAATGAACCAGATATGTATGTTTTGGGCTTTCAGGAGATTGTCCCTTTAAATGCTGGAAATGTGCTGGTATTAGAGGATAATGAACCTGCTGCAAAATGGCTTGCTTTAATCAACCATTCACTCAATGGTCCTTCAGACTTGGCTTCCAAAGGACTAACACCGACTGTATCTTTTGGCGGCTCATTGTTCTTCCAAAAGCCTTCTCTGAAgaagattaagaaatatttcaAGAAAGTAAATGGAAAGAGGCTAAAAAGTTGTAACTGTGTTCTTGACATCGAAAGGAAGGCTGCTAAGGATTTCTGTTTTCGCTGTCAAGAATCAAACTTCAGTTCAGATGATTCTTCCACTGAAGAGGAGGATGAGAGTTTCCCAATTCCTGTTGCCTTGGCTACTAATCAGATGAAATACAGTCTTGTCGCATGTAAACAAATGGTTGGAATTTTTGTAAGTGTCTGGATGAGGAGAGAACTTGTTCAGTATGTAGGCCATTTGAGAATATGTTGCACTAGCCGCGGGATCATGGGTTGCCTAGGGAACAAGGGGTGTATATCAGTGAGCATGTCgttttatcaaacaagtttttgCTTTATCTGTAGTCATTTGGCATCTGGAGAGAAAGAGGGTGACGAGCTTCGCAGGAATCTTGATGTCATTGAGATTCTGAAGAACACTCAGTTCCCAAGGATTTGCAAGACACCACACAGTAGGATGCCTGACAAAATTTTAGATCACGACCGAATCATATGGTTTGGGGACTTGAATTACAGAATTTCTTTGAGCTATGATGATGCAAAAAGGCTTGTGGAAAAGAAAGACTGGCCTGCCCTTTTTAACAAGGATCAGCTTAAAATGGAAAGGGAAGCAGGTCGTGTATTTAAGGGGTGGAAAGAGGGAGAGATCTACTTTGCACCTACTTATAAATATGTCTTCAACTCAGACACTTACTATGTTGAAGGTGTAAAAGTTTCAAAGAACAAAAGGAGAACTCCTGCTTGGTGTGATAGAATCTTGTGGCATGGAAGGGGAATACAGCAACATTCATATGTCCGTAAAGAATTTCAGTTTTCTGACCATCGACCTGTTTGTGCAACATTTGTGGTAGAAGTTGAGATTATGTTCAGGGGACAAAAGAAGAAAGTTTCAACTTACAACTTTCAGAATATTGATGATCTTGTATCCGCAAGAAGTCCATATTATTCTTGA 1317 0.3964 MSCGEAIQNFRVFAATWNVGGQCPAGNLDLSDFLQVRNEPDMYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINHSLNGPSDLASKGLTPTVSFGGSLFFQKPSLKKIKKYFKKVNGKRLKSCNCVLDIERKAAKDFCFRCQESNFSSDDSSTEEEDESFPIPVALATNQMKYSLVACKQMVGIFVSVWMRRELVQYVGHLRICCTSRGIMGCLGNKGCISVSMSFYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTPHSRMPDKILDHDRIIWFGDLNYRISLSYDDAKRLVEKKDWPALFNKDQLKMEREAGRVFKGWKEGEIYFAPTYKYVFNSDTYYVEGVKVSKNKRRTPAWCDRILWHGRGIQQHSYVRKEFQFSDHRPVCATFVVEVEIMFRGQKKKVSTYNFQNIDDLVSARSPYYS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0353 438 Gene3D Endonuclease/exonuclease/phosphatase 4 434 IPR036691 -
Ssu2g0353 438 SUPERFAMILY DNase I-like 7 424 IPR036691 -
Ssu2g0353 438 Pfam Endonuclease/Exonuclease/phosphatase family 15 396 IPR005135 GO:0003824
Ssu2g0353 438 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 420 IPR045849 GO:0004445|GO:0046855
Ssu2g0353 438 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 10 7 420 - -
Ssu2g0353 438 SMART i5p_5 8 411 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0353 Ssu-Chr2 22541346 22544172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0353 174 417 Acyl Lipid Metabolism Gene Families AT2G43900 27.915 8.28e-30 121