Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0348 ATGCCTGAACAAAATCATGCCATCCCTCTTCTTACTCCTTACAGGATGGGGAACTTCAATCTTTCCCACAGAATCGTTTTGGCACCACTATATAGAGCAAGATCTTACAACAACGTTCCTCAGCCCCATGCTATCCTATATTACTCTCAGAGAGCTACCAAGGGAGGTCTTCTGATTGCTGAAGCTAGTTCTATTTCACCCACGTCTCAATATCATCCAAATGCACCTGGTATATGGTCAAGAGAGCAAATCGAAGCATGGAAACACGTTGTAGATGCTGTTCATGCCAAAGGTGGCATATTCTTTTGTCAGATTTTTCATATGGGAAGGGTTTCAGATCCAGATTTTAATCCAAGTGGGCAAGCACCAATATCATCAACCAACAAACCATTGATACCGAATGGCATGGAACCAAGGCCGTTAAGGACAGATGAAATTCCTCATATTATCAATGACTTCAGAATTGCAGCAAGGAATGCTATGGAAGCAGATGGCAAAATATCAAAAGAGTTTCTTAACAAGGTTTTTGAGAAGGTTGATATGAAGCTACTTAAGTCCTTCGATCTTTCGTGCATCTGCATTACCATCTACGATCATAGTGGTGAATGGACTGCAAAACAGTATTTCGACAACATCAAGGCTTCGCTAACTCTATCTTTGAGCTCCAACGAAAGTTTCTACAAGCCGCTCTCGCCATTGGTGTTGGAGTTGCCATATTCTCTTCTTTCTATTCACTTCCcctaa 744 0.414 MPEQNHAIPLLTPYRMGNFNLSHRIVLAPLYRARSYNNVPQPHAILYYSQRATKGGLLIAEASSISPTSQYHPNAPGIWSREQIEAWKHVVDAVHAKGGIFFCQIFHMGRVSDPDFNPSGQAPISSTNKPLIPNGMEPRPLRTDEIPHIINDFRIAARNAMEADGKISKEFLNKVFEKVDMKLLKSFDLSCICITIYDHSGEWTAKQYFDNIKASLTLSLSSNESFYKPLSPLVLELPYSLLSIHFP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0348 247 Gene3D Aldolase class I 2 167 IPR013785 -
Ssu2g0348 247 Pfam NADH:flavin oxidoreductase / NADH oxidase family 10 163 IPR001155 GO:0010181|GO:0016491
Ssu2g0348 247 PANTHER NADH OXIDOREDUCTASE-RELATED 7 164 IPR045247 GO:0010181|GO:0016491
Ssu2g0348 247 SUPERFAMILY FMN-linked oxidoreductases 9 163 - -
Ssu2g0348 247 PANTHER 12-OXOPHYTODIENOATE REDUCTASE 1-RELATED 7 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0348 Ssu-Chr2 22406792 22433504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0348 3 196 Acyl Lipid Metabolism Gene Families AT1G76680 56.863 9.68e-76 233