Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0346 ATGGGAGAGGAGAATGTTGAACAGCCATTGTTGGAGAAAAAGTACTACAAGGACTGCCCCGGTTGTAAAGTGGACCAAGCCAAGGAGTCGAGTCAGGGACAGGGTGTACCCGTCAGAAATCTTCTCATAATATGGATTGTGGTGTTGTGTGCTGCGCTGCCTATATCGTCTCTCTTCCCATTCCTTTATTTCATGGTAAGGGATTTTCATATTGCGAAAACAGAAGCTGATATTAGTTCTTATGCTGGTTATGTGGGTTCTGCATTCATGCTTGGCAGATGTTTGACATCTGTATTGTGGGGAATTGTAGCTGATCGCTATGGTCGAAAGCCTGTTTTAGTTATAGGGATTATTGCAGTTGTCATATTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCTGTTATCACGAGATTTCTTCTGGGAAGTTTAAATGGTTTGCTTGGACCAGTGAAGGCCTATGCTACTGAACTTTTTCGAGAAGAACACCAAGCTATAGGACTCTCAACTGTCAGTGCAGCTTGGGGCATAGGTTTAATCATTGGCCCAGCACTGGGAGGCTATTTGGCTCAGCCAGTAGAGAAGTACCCTCATATTTTTCCGAAGGATTCCTTTTGGGATAAGTTTCCATACTTCTTGCCCAGCTTTATAATATCAGCACTTGCATTTGTAGTAGCTATTGGCTGTATCTGGATTCCGGAAACACTTCACAACCACAATTGTAGCAATGAATCCATAGACGATGCCAAAGCTTTAGAAAATGGAAGCAGTGGGGATGGCAAAGACAAGATAATCCAAAAGAATGAAAACCTCTTCCTGAACTGGCCCTTAATGTCATCTGTCATTGTTTATTGTGTTTTCTCACTTCATGATATTGCTTATCAAGAGGTTTTCTCGTTATGGGCTGTCAGTCCTCAAAGGCTGGGGGGTTTGAACTTTACAACTGATGATGTTGGTAATGTTCTTTCAATATCAGGTCTTGCACTTATCATTTACCAACTTACCATATACCCATCTGTGGAAAAAGCTAGTGGTCCTATTGGTATTGCCCGCATCTCAGGGATGTTATCCATACCACTTTTGCAAAGCTACCCCTTCATAACATTGTTGTCAGGCTTAGCACTATACATAATGATAAGTATTGCTTCAATTCTGAAGAATATTTTGTCTCTGACCATTGTAACTGGTTTGTTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGGGGGGCAGCTAATGGCATTGCTATGACAGGCATGTCTCTATTCAAAGCTATTGGCCCTGCTACAGGTGGTGCAATATTAACTTGGTCACAAAAGCGGATGGATGCTTCCTTCCTCCCAGGCATCCATATGGTCTTCTTTGTCCTGAACATAGTTGAAGGACTTGGAATACTAATGATGTTCAAACCACTCCTtgttgaaaagaagaaaacacgCTCAGATCAGCTACACTGA 1467 0.4172 MGEENVEQPLLEKKYYKDCPGCKVDQAKESSQGQGVPVRNLLIIWIVVLCAALPISSLFPFLYFMVRDFHIAKTEADISSYAGYVGSAFMLGRCLTSVLWGIVADRYGRKPVLVIGIIAVVIFNTLFGLSTSFWMAVITRFLLGSLNGLLGPVKAYATELFREEHQAIGLSTVSAAWGIGLIIGPALGGYLAQPVEKYPHIFPKDSFWDKFPYFLPSFIISALAFVVAIGCIWIPETLHNHNCSNESIDDAKALENGSSGDGKDKIIQKNENLFLNWPLMSSVIVYCVFSLHDIAYQEVFSLWAVSPQRLGGLNFTTDDVGNVLSISGLALIIYQLTIYPSVEKASGPIGIARISGMLSIPLLQSYPFITLLSGLALYIMISIASILKNILSLTIVTGLFLLQNRAVEQHQRGAANGIAMTGMSLFKAIGPATGGAILTWSQKRMDASFLPGIHMVFFVLNIVEGLGILMMFKPLLVEKKKTRSDQLH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0346 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 479 IPR020846 GO:0022857
Ssu2g0346 488 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 486 - -
Ssu2g0346 488 PRINTS Tetracycline resistance protein signature 113 137 IPR001958 GO:0022857
Ssu2g0346 488 PRINTS Tetracycline resistance protein signature 170 192 IPR001958 GO:0022857
Ssu2g0346 488 PRINTS Tetracycline resistance protein signature 344 364 IPR001958 GO:0022857
Ssu2g0346 488 Gene3D MFS general substrate transporter like domains 37 463 IPR036259 -
Ssu2g0346 488 CDD MFS_SLC46_TetA_like 44 473 - -
Ssu2g0346 488 Pfam Major Facilitator Superfamily 44 384 IPR011701 GO:0022857|GO:0055085
Ssu2g0346 488 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 486 - -
Ssu2g0346 488 SUPERFAMILY MFS general substrate transporter 24 476 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0346 Ssu-Chr2 22147908 22196239 Dispersed/Wgd