Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0340 ATGGACATCGAGCAGAAGCAATCGGAGCTCATCGACCATTTCGTCAACCGAGCCTCCGCCGCCTCCGACGCCGCCGCACTCTCTTCCGTCCTCGTCGAAGCCACTTCTCACCCGTCGCTCTTCGCCTTCTCCGAGATTCTCGCTCTCCCCAATCTTCTGCAGCTTGAAGCAACTGAGAATTCTGCTTACCTTGATATGCTTCGGTTGTTTGCACATGGTACATGGAGTGATTACAAGAGTAATGCTGACCGTCTTCCACAATTGATACCTGATCAGACCCTCAAGCTTAAACAACTTACAGTTCTTACACTGGCTGAGACATACAAGGTACTACCCTATGACCAACTGATGCAGGAGTTAGACGTGACAAATGTTCGTGAACTTGAagattttctaattaatgaatGCATGTATGCGGGAATAGTCCGAGGAAAGCTGGATCAATTGCGACGATGCTTTGAGGTCCAATTTGCAGCAGGTAGGGACTTGAGGCCTGATCAACTGGGGAATATGATACAGACTCTCTCTAACTGGTTGTCTACGTCAGAAAATCTGCTTGTTTCAATTCAAGAGAAGATAAAATGGGCTGATGCTATGAGTGAAATTGACAAGAAGCACAGGAAGGATGTGGAAGAGAAGGTAGAAGAAGTAAAGAAGTCCATTTTCAAGGCCGACATCGACTTCAGAGGCCATGAGGAGATCTGCTCTGAATCTGGTGGAGTGATGGATTATGAAGAAGATCGAAGCCGACCAAAGAGGAGGCGGCACCCAATATCTTGA 780 0.4667 MDIEQKQSELIDHFVNRASAASDAAALSSVLVEATSHPSLFAFSEILALPNLLQLEATENSAYLDMLRLFAHGTWSDYKSNADRLPQLIPDQTLKLKQLTVLTLAETYKVLPYDQLMQELDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSNWLSTSENLLVSIQEKIKWADAMSEIDKKHRKDVEEKVEEVKKSIFKADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0340 259 SMART PINT_4 87 178 IPR000717 -
Ssu2g0340 259 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 87 178 - -
Ssu2g0340 259 Pfam COP9 signalosome complex subunit 7a helix I domain 168 215 IPR041481 GO:0008180|GO:0010387
Ssu2g0340 259 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 4 253 IPR045237 -
Ssu2g0340 259 Pfam PCI domain 63 155 IPR000717 -
Ssu2g0340 259 ProSiteProfiles PCI domain profile. 1 160 IPR000717 -
Ssu2g0340 259 MobiDBLite consensus disorder prediction 239 259 - -
Ssu2g0340 259 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 7 4 253 - -
Ssu2g0340 259 MobiDBLite consensus disorder prediction 239 253 - -