Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0331 atgaattttgaaatatgggATCTTGCAGAGGAGGAAAGTAACATCCTCCAAACATTAAGATTTAGTTATAATCAGCTTCCTTCCTACCTAAAGCGGTGTTTTGCATACTGCTCCATACTACCAAAAGGCTTTGAATTTGAGGAGAAAGAGATAGTGCTGCTATGGATGGCTGAAGGACTTTTAGAGCAACAATCACAGAAGCAAATGGAAGATGTTGGCCATGAGTACTTTCAAGAGCTGCTCTCTGCATCACTTTTTCAAAGGTCAACTAGCAACAGATCATTGTATGTAATACATGACCTTATCAATGATCTAGCTCAATGGGTGGCTGGAGAGTCCTGTTTCAAATTGGACAATAATTTTCACTCTCACAGacgaaagaaaaagaaaattacccaAAGGACTCGGTATGCATCTTACATTGGTGGTGAATATGATGGTTTTCAAATGTTTCAGGCCTTTAAAGAAGCCAAGTCCTTAAGAACATTCCTCCCTCTAAAGCATCCAAGAGTAGAAGAATGGTCCTACATAGCTAGTCATGTTCCTTTTACATTGTTACCTGAGTTAAGATGCTTAAGGGCATTATCATTGAGTGGATATTACATCAATAAGCTGCTTAATTCAGTTAGCAATTTGAATCTTCTACGCTACCTGAATCTTTCTTGTACTAACCTCAGACAGTTGCCAGAATCAATCTGCAGTCTATGCAATCTGCAAACATTACTACTGAGaaattgttttaatcttgaGCAGCTGCCATCAAACTTGAGTGATTTGATCAACCTGCGTCATCTAGATATCACTAGAGCACATTCTTTAACAGGTATGCCACATGGTATTGGTAAATTGACACATCTTCAaactttgtcaaattttgttgtaGGCCCAAGGGGGATAGGAGAATTGATGAAGCTGTCAAATATCCGAGGAGGACTTTCTGTGTCCAGGTTAGAGCATGTGACTAACCCTCGAGAAGCAAGTGAAGCTATGTTAAATAAGAAGGTAGGAATTGATGTGCTGAAATTGAAATGgagttgttgtatgaataatCAGCCACATATTGAAAGAGCAAAAGAAGTGCTTCAGATCCTACAACCTCACAAAAGTCTAGCAAAGCTTACTATTAAGTGCTATGGTGGTACATGTTTCCCAAAATGGATAGGAGATGCATCCTACAAGAGCCTACTGTTCTTAAAGTTGAAAAATTGTGCACATTGCACATCTTTGCCAGCACTTGGAAACCTCCATGCCCTCAAAGAACTTTACATTATTGGAATGAAAGAAGTATGCCGCATTGATGGTGGGTTCTACGGTAATGCTTGCTTAAGTCCTTTTCCTTCACTGGAGAGCCTACACTTCATGGACATGGAAAAATGGGAAAATTGGTTCCTCTATGACAACAATGAGCAGAATGacatattttcttctttgcaaCAGCTTTTCATTGTGAGGTGTCCCAAACTTTTGGGTAAATTACCAGAAAATCTCCCTGCTCTCAAACATGTAGTAGTTAAAGAATGTGAACAATTGCTGGTTACCATTTCAAGCCTTCCACTGCTGTTCAAACTAGAAATTGAAGGATGCAAAGGCTTAGTTGTTAATTGTGCAAATGAATTCAATTTACTGAATTCCATGGCTGTTTCAAGAATCTTGGAGTTCACATTATTAATGGAGAGGTTGGTACAGGCATTCAAAAAAGTAGAAGAACTCAAAATCGTCAGTTGTGCTCTTGATGAAATAGTTCTTAATGATTTATGGGGAAATGAAGTTTGGATTGAGAAGAATCCACATGGTTTGTCATCCATGCTCAGATTAATTGAGATTAGAAATTGCAATGTCATGAAATCTATTCCTAAAGTACTAATGGTCAACAGCCATGTTCTCAAACGCTTGTACATATGTAACTGTGATTCCCTAGTCTTTGTCACAATGGATCAACTGCCTCCCTCTCTGAAATCATTGGAGATATCAAATTGCAAAAACTTGAGATGTTTACTGGATAATGGAACATGCTCTTCATCGATAATTATGCATGATGACAGTGTACAGCACAGTGGCACAATCATTTCTCATTTGGAGTATGTATACATTGGCTGGTGTCCATCTCTCACTTGCATATCAAGAAGTGGTGAGTTACCTGAGTCTGTCAAACTTTTATTCATTTGGAACTGTTCAGAGCTATCGTGCTTGTCAATGAGTGGCCAATTACCAAAAAGCCTTGAAAAACTGGAAATTCAATCCTGTCCAAAGCTAGAGTCAATAGCAAACAGGTTGCACAGAAACACCTCCTTGGAATCTATTCAGATATGGAACTGTGAAAACCTCAAATCCCTCCCTGAAGGCCTACATTTCCTTGTGAATTTAAAGGAGATCAAAATTATTGGTTGCCCAAGTTTGGTTTCTTTTCGAGAAGAAGGTTTGCCCACCTCTAGTCTAACAGAACTTTGCATCATGAGTTGTGAGAAACTAGAGGCCCTACCAGACTGCATGCACGATCTTGACTCCCTCAAAGAGCTGGAGATAGGATACTGTCCTAGCATTCAATATGTTCCTGAAATAAACTTTCCAGACAACATAACAACCCTTTGGATCAATGACCATAATGCCAGTGAAGCGATGTTCAACTGGGGCTTATACAAGCTCTCTTTTCTTAGGGACCTCACCATCATAGGTGGAAGTTTGTTTATGCCACTTGAAAAGCTGGGGAGAATGCTTCCATCCTCTTTAACTAGCCTCACTATTCAAGGTTTTCCACACTTGGAAAAGCTGTCACCAGAGGGCTTTCATAAACTTACCTCTTTATCTAGCCTAACCCTAAGAGATCTCTCAAATCTAACATTCCTGCCATTCTTGGGGTTTAAATACCTTACCTCTCTTGAAGAGCTTTCTATTTATAACTGTCCCAAGCTCTTACGTTTACCAGAAAAGGGCCTTCCTTCATCACTTTTGGAGCTATATATACAAGACTGCCCTTTTCTGAAAGATACATGCAGGGAAGACAATGGGAAAGACTGGTCGAAGATTGCTGACATCCCTTATGTTGAGATTGATGGAAAATTTATCTCTGACTCAGATTATGAGGATTGA 3087 0.3819 MNFEIWDLAEEESNILQTLRFSYNQLPSYLKRCFAYCSILPKGFEFEEKEIVLLWMAEGLLEQQSQKQMEDVGHEYFQELLSASLFQRSTSNRSLYVIHDLINDLAQWVAGESCFKLDNNFHSHRRKKKKITQRTRYASYIGGEYDGFQMFQAFKEAKSLRTFLPLKHPRVEEWSYIASHVPFTLLPELRCLRALSLSGYYINKLLNSVSNLNLLRYLNLSCTNLRQLPESICSLCNLQTLLLRNCFNLEQLPSNLSDLINLRHLDITRAHSLTGMPHGIGKLTHLQTLSNFVVGPRGIGELMKLSNIRGGLSVSRLEHVTNPREASEAMLNKKVGIDVLKLKWSCCMNNQPHIERAKEVLQILQPHKSLAKLTIKCYGGTCFPKWIGDASYKSLLFLKLKNCAHCTSLPALGNLHALKELYIIGMKEVCRIDGGFYGNACLSPFPSLESLHFMDMEKWENWFLYDNNEQNDIFSSLQQLFIVRCPKLLGKLPENLPALKHVVVKECEQLLVTISSLPLLFKLEIEGCKGLVVNCANEFNLLNSMAVSRILEFTLLMERLVQAFKKVEELKIVSCALDEIVLNDLWGNEVWIEKNPHGLSSMLRLIEIRNCNVMKSIPKVLMVNSHVLKRLYICNCDSLVFVTMDQLPPSLKSLEISNCKNLRCLLDNGTCSSSIIMHDDSVQHSGTIISHLEYVYIGWCPSLTCISRSGELPESVKLLFIWNCSELSCLSMSGQLPKSLEKLEIQSCPKLESIANRLHRNTSLESIQIWNCENLKSLPEGLHFLVNLKEIKIIGCPSLVSFREEGLPTSSLTELCIMSCEKLEALPDCMHDLDSLKELEIGYCPSIQYVPEINFPDNITTLWINDHNASEAMFNWGLYKLSFLRDLTIIGGSLFMPLEKLGRMLPSSLTSLTIQGFPHLEKLSPEGFHKLTSLSSLTLRDLSNLTFLPFLGFKYLTSLEELSIYNCPKLLRLPEKGLPSSLLELYIQDCPFLKDTCREDNGKDWSKIADIPYVEIDGKFISDSDYED 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0331 1028 SUPERFAMILY L domain-like 98 552 - -
Ssu2g0331 1028 Gene3D Ribonuclease Inhibitor 153 550 IPR032675 -
Ssu2g0331 1028 PANTHER OS06G0667900 PROTEIN 650 807 - -
Ssu2g0331 1028 PANTHER OS06G0667900 PROTEIN 2 669 - -
Ssu2g0331 1028 SUPERFAMILY L domain-like 690 1005 - -
Ssu2g0331 1028 Gene3D Ribonuclease Inhibitor 867 1000 IPR032675 -
Ssu2g0331 1028 PANTHER OS06G0667900 PROTEIN 810 979 - -
Ssu2g0331 1028 Gene3D Ribonuclease Inhibitor 666 757 IPR032675 -
Ssu2g0331 1028 Gene3D Ribonuclease Inhibitor 758 864 IPR032675 -
Ssu2g0331 1028 Gene3D - 17 108 IPR036388 -
Ssu2g0331 1028 PANTHER DISEASE RESISTANCE PROTEIN RP 650 807 IPR044974 GO:0006952
Ssu2g0331 1028 PANTHER DISEASE RESISTANCE PROTEIN RP 810 979 IPR044974 GO:0006952
Ssu2g0331 1028 PANTHER DISEASE RESISTANCE PROTEIN RP 2 669 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0331 Ssu-Chr2 21637067 21640153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0331 192 289 WRKY Transcription Factor Family AT4G12020 35.354 1.24e-06 50.8