Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0307 ATGATTTCCATCAGTGGATACATGGCTCCAGAGTATGCTATGGAAGGATTGTTTTCAGTGAAGTCCGATGTTTTCAGCTATGGAGTTCTTGTTCTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCTATCAGATTGTGGTCAAAgtcttcttttttatGCCTGGAAAATATGGTGTGCAGGAAAATGTTTGGAACTTATGGATCCAGTGCTGGAGGAATCTTGCATAGAGAGTGAAGTTGTGAAGTGCATGCACATTGGTCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCCACTGTTGTTGTAATGCTAGCAAGTGACACAATGGCCCTTCCAAAACCTAACCAGCCAGCATTTTCAGTTGGAAGAATGACCCCGGAAGATGCATCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATGATGTAACAGTCTCTAACATTTTTCCAAGGTAA 474 0.3966 MISISGYMAPEYAMEGLFSVKSDVFSYGVLVLEIICGKKNSGFYLSDCGQSLLFYAWKIWCAGKCLELMDPVLEESCIESEVVKCMHIGLLCVQEDAADRPTMSTVVVMLASDTMALPKPNQPAFSVGRMTPEDASTSKSSKNLSINDVTVSNIFPR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0307 157 MobiDBLite consensus disorder prediction 121 141 - -
Ssu2g0307 157 Pfam Domain of unknown function (DUF3403) 112 157 IPR021820 GO:0004674
Ssu2g0307 157 Pfam Protein tyrosine and serine/threonine kinase 7 109 IPR001245 GO:0004672|GO:0006468
Ssu2g0307 157 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 155 - -
Ssu2g0307 157 SUPERFAMILY Protein kinase-like (PK-like) 6 144 IPR011009 -
Ssu2g0307 157 Gene3D Transferase(Phosphotransferase) domain 1 2 121 - -
Ssu2g0307 157 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 5 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0307 Ssu-Chr2 19064452 19067447 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0307 1 157 Receptor kinase-like Gene Family AT4G23150 53.374 1.65e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu2g0307 PK_Tyr_Ser-Thr 1.6e-09 CL0016