Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0304 ATGGCTCCTGAGTATGCGATGGAAGGATTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCTATCAGATTGTGGTGAAAGTCTTATTCTATATGCTGGGAGAATATGGTGTGCAGGAAAATGTATGGAATTGATGGATCTAATGCTGGTAAAATCCTTCATAGCCAGTGAAGTTGAGAGGTGCATACACATTGGTTTGTTGTGTGTTCAAGAAAATGCAAAAGATAGACCAACCATGTCCGATGTTGTTGTAATGCTAGCGAGTGACACAATGGCCCTTCCAAAACCCAAGCACCCTGCATTTTCTGCTGGAAGAACGACCTTAAATGAAGCATCAACTTCAAGAAATTCCAAGAATCTTTCCATTAATGATGCAACAGTCTCTACCATTTTACCAAGGTAA 453 0.3907 MAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSDCGESLILYAGRIWCAGKCMELMDLMLVKSFIASEVERCIHIGLLCVQENAKDRPTMSDVVVMLASDTMALPKPKHPAFSAGRTTLNEASTSRNSKNLSINDATVSTILPR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0304 150 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Ssu2g0304 150 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 1 148 - -
Ssu2g0304 150 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Ssu2g0304 150 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0304 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
Ssu2g0304 150 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Ssu2g0304 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0304 Ssu-Chr2 18960023 18960560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0304 1 150 Receptor kinase-like Gene Family AT4G23150 49.677 3.05e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu2g0304 PK_Tyr_Ser-Thr 3.6e-08 CL0016