Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0271 ATGGAAGAAGAGAATGCATTAGAGCTTCTCCAGAGATACCGGAGGGACCGAAGAGTGCTTCTTGATTTTATACTTTCAGGGAGCTTAATCAAGAAAGTTGTAATGCCACCTGGTGCAGTTACACTGGATGATGTGGATCTAGATCAAGTTAGTGTTGATTATGTCCTCAACTGTGCGAAAAAGAGTATAATGCTTGAACTTTCAGAAGCAATTAGAGATTATCATGATCATACTGGGTTGCCCCAAATGAGTGATACAGGTTCAGTCGGTGAATTTTATTTGGTCACTGATCCTGAGTCTTCAGGTTCACCTCCCAGGAGGCCACCACCAACTGTTCCTATTTCTGCGGTGCCTCCTGTTGCTGTTTTTCCGCCATCCCCAATTATTTCTAATGTATCGAGATCAGTGTCTTTTGACTCTACTCAAGAAAAGGAGCTAACTGTGGATGACATTGAAGACTttgaggatgatgatgatgctGCAGTGGTCGAAAGCTTCAGGGCTAAAAGGACTCTTAATGATGCTTCTGATCTTGCAGTGAAATTGCCTTCTTTCTCCACAGGCATCTCAGATGATGATCTTCGTGAAACTGCATATGAGATCCTCTTGGCTTGTGCTGGAGCCACAGGGGGTCTGATTgtcccatcaaaagaaaaaaagaaagataaaaaatccAGGTTGATTAGGAAGCTTGGGCGCAGCAAAAGTGGAAGTGTTGTATCCCAGTCTCAGAATGCTCCTGGATTAGTTGGCTTGTTGGAAACCATGCGTGTTCAAATGGAGATATCTGAGTCAATGGATATTAGAACAAGACAAGGCTTGCTAAATGCTCTTGTGGGGAAGGCGGGGAAAAGGATGGATACTCTATTGATTCCTTTGGAGTTGCTTTGCTGTATTTCACGTTCAGAATTTTCTGATAAGAAGGCTTTTATACGTTGGCAAAAGAGGCAGTTAAAAGTTTTAGAGGAGGGGCTTGTTAATCACCCTGCCGTTGGATTTGGTGAATCTGGACGCAAGACAAATGAGTTGAGGATTCTGTTGGCCAAGATTGAAGAAGCAGAGtttctCCCATCTTCAACTGGTGAACTTCAAAGGACAGAATGCTTGAGATCCCTAAGGGAGATTGCAGTTCCACTTGCCGAGAGGCCAGCTCGGGGTGACTTGACTGGTGAAATATGCCATTGGGCAGATGGTTACCACTTAAATGTCAGACTATATGAGAAATTACTTTTAAGTGTATTTGACATGCTAGATGAAGGAAAGCTGACAGAGGAAGTGGAAGAAATTCTTGAACTTTTGAAGTCGACTTGGAGAGTTTTAGGAATCATGGAGACAATCCATCACACTTGCTATGCATGGGTTTTATTTCGTCAGTATGTTATCACAAGGGAACATGGGGTTTTGCTGCATGCACTTgagcaattaaataaaataccacTGATGGAGCAACGAGGCCAACAAGAGAGGTTGCACTTGAAAAGCTTGCATTCCAAGGTTGAAGGTGAACGAGATATGTCTTTCTTACAGTCTTTCTTAACACCAATTCAGAGATGGACTGACAAGCAGCTTGGAGATTACCATCTGCACTTCAATGAGGGTTCAGCAACTATGGAAAAGATTGTAGCAGTTGCAATGATTACCAGGAGGCTTCTACTGGAAGAACCAGAAACTACCTCACAGTCCTTGCCAATTAGTGATCGTGATCAGATAGagatatatatatcatcatcaaTTAAGAATGCATTTTCAAGGACAGTGCAAGTTGTTGAAAGAGTAGATATGTCAAACGAGCATCCCTTGGCATTGCTTGCAGAAGAACTTAAGAAGCTCCTGAACAGAGATTCAGTAACTTTCTTGCCTGTTTTATCTCAGAGGCATCCTCAAGCAACTGTTGTATCTTCATCATTAGTTCACAAACTTTATGGCCACAGACTGAAACCCTTTCTGGATGGTGCAGAACATTTAACTGAGGATGTCATTTCTGTATTCCCTGCAGCTGAAAGTCTAGAGCAGTTCATAATGGCACTTATTACATCTGTATGCCATGAAGAAACTGCTGAGATCTTGTTGAAGAAATTGAATCTCTACCAGATTGAGACGAAATCTGGAACATTGGTGTTACGTTGGGTCAATTCACAGCTTGGAAGAATTTTAGGTTGGGTGGAGCGGGTTATTCAACAGGAGCATTGGGACCCGATATCTCCTCAACAACGGCATGCTGGTTCTATTGTGGAAGTTTACAGGATTGTTGAGGAGACGGTTGATCAATTTTTTGGTCTTAAAGTTCCAATGAGGTTTACAGAATTGAATAGCTTGTTTCGTGGCATTGACAATGCTCTTCAAGTGTATGCAAATAATGTTGTTAATGACTTGGCAAACAAGGAGGATCTAATACCACCTGTGCCTATTCTCACACGGTACAAAAAGGAAGCTGGAATAAAGGCTTTTGTAAGGAAGGAACTATTTGATGCTCGTGTGCCTGAGCCTGATGAGACAAGGCCCAGCCAAATTAGTGTCCTCACAACTCCAACACTTTGTGTtcaattaaatacattatatTATGCGATTAGTCATCTGAATAAATTGGAAGATAACATCTGGGAGCGATGGACAAGTAAACGGTCCCAGGAAAAACTCATAAAGTTTGGGACAGTTCTTGAATTACATTTTGGGAGTGATTTGTGGGATGAACTTAGCCAACTTTGTGATATTGTTGTGGAGCCTCTCAGGGATCGTATAGTGACAAGTCTTCTTCAGGCATCATTGGATGGGTTACTCCGTGTTATCTTAGATGGGGGTCCATCAAGAGTTTTCTTTCCTGGTGATGCAAAATTATTAGAGGAAGATCTGGAGGTCTTAAAGGAATTCTTTATATCTGGAGGTGACGGGCTCCCTCGGGGTGTTGTTGAAAATCAGGTTGCACGTGTTCGGCATGTGATCAAGTTGCACGGCTATGAGGTTAGTTCACCTACTTCTGTGTACACAAACAACCTAATAATAAGTGACATATGA 3012 0.4087 MEEENALELLQRYRRDRRVLLDFILSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKSIMLELSEAIRDYHDHTGLPQMSDTGSVGEFYLVTDPESSGSPPRRPPPTVPISAVPPVAVFPPSPIISNVSRSVSFDSTQEKELTVDDIEDFEDDDDAAVVESFRAKRTLNDASDLAVKLPSFSTGISDDDLRETAYEILLACAGATGGLIVPSKEKKKDKKSRLIRKLGRSKSGSVVSQSQNAPGLVGLLETMRVQMEISESMDIRTRQGLLNALVGKAGKRMDTLLIPLELLCCISRSEFSDKKAFIRWQKRQLKVLEEGLVNHPAVGFGESGRKTNELRILLAKIEEAEFLPSSTGELQRTECLRSLREIAVPLAERPARGDLTGEICHWADGYHLNVRLYEKLLLSVFDMLDEGKLTEEVEEILELLKSTWRVLGIMETIHHTCYAWVLFRQYVITREHGVLLHALEQLNKIPLMEQRGQQERLHLKSLHSKVEGERDMSFLQSFLTPIQRWTDKQLGDYHLHFNEGSATMEKIVAVAMITRRLLLEEPETTSQSLPISDRDQIEIYISSSIKNAFSRTVQVVERVDMSNEHPLALLAEELKKLLNRDSVTFLPVLSQRHPQATVVSSSLVHKLYGHRLKPFLDGAEHLTEDVISVFPAAESLEQFIMALITSVCHEETAEILLKKLNLYQIETKSGTLVLRWVNSQLGRILGWVERVIQQEHWDPISPQQRHAGSIVEVYRIVEETVDQFFGLKVPMRFTELNSLFRGIDNALQVYANNVVNDLANKEDLIPPVPILTRYKKEAGIKAFVRKELFDARVPEPDETRPSQISVLTTPTLCVQLNTLYYAISHLNKLEDNIWERWTSKRSQEKLIKFGTVLELHFGSDLWDELSQLCDIVVEPLRDRIVTSLLQASLDGLLRVILDGGPSRVFFPGDAKLLEEDLEVLKEFFISGGDGLPRGVVENQVARVRHVIKLHGYEVSSPTSVYTNNLIISDI 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0271 1003 Gene3D - 702 891 - -
Ssu2g0271 1003 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 660 801 IPR014770 -
Ssu2g0271 1003 PANTHER PROTEIN UNC-13 HOMOLOG 48 877 IPR008528 -
Ssu2g0271 1003 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 884 994 IPR014772 -
Ssu2g0271 1003 PANTHER PROTEIN UNC-13 HOMOLOG 48 877 - -
Ssu2g0271 1003 PANTHER PROTEIN UNC-13 HOMOLOG 896 988 - -
Ssu2g0271 1003 PANTHER PROTEIN UNC-13 HOMOLOG 896 988 IPR008528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0271 Ssu-Chr2 16229679 16254461 Proximal