Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0268 ATGATGGCCCTTGAAAATTCAGaaaatatgcaaataaactGTGAGGCATCTTTAAAATGCCTCCAGGGCAAGGGTTTCCCTTGCAATTTTCAAGGTAATGGGAGTTCTACAGAAGGTTTTACAGAGCTTAAAAATGAGCCTGGTACTCATCTAGCTGGGGATGTTGCTGAACCTAACTGCCATATAGGCAGTAAGTTTCTTGAGCCTTCCAATGAATTTCACAACAAACCTACTTATCACCAAAATTTCAGCACCTGGACACCCTGCCATTTTAACTCTCACAGGGTGCAGCAATGCCAAATGAATGCTTTTGAGAGCcatttttatccttatcctGTCGAGAACCAGCTTCAGTGTGTTCCAATTAATATGGTTGCTCAGGGTTACCCGCGTGAGCAATATCAAGAATTTCAGTATTTTGTGGTAATAGACTTTGAGGCTACCTGTGACAAGGATAAAAATCCTCACCCTcaagaaataattgaatttcCATCTGTTATAGTGAGTAGCATCACTGGCCAGTTGGAAGCGTGTTTTCAAACATATGTGAGGCCCACCTGCAACCAGCTTCTGAGTGATTTCTGCAAGGATCTGACTGGTATCCAGCAAATTCAGGTGGACAGAGGTGTTACATTGAGTGAGGCTCTACTTAGGCATGACAAATGGCTTGAGAAGAAGGGAATAAAGAATTCCAACTTTGCTGTGGTTACATGGTCCAGCTGGGATTGTCGGGTGATGCTTGAATCTGAGTGCCGATTCAAGAAAATTAGGAAGCCTCCTTATTTCAACCGCTGGATCAACTTAAAGATTCCTTTCAGTGAGGTATTTGGTGCCGTGAGGTGCAATCTAAAGGAAGCTGTTGAGATAGCCGGCTTGGCCTGGCAGGGTCGTGCACATTGTGGccttgatgatgccaaaaataCTGCTCGCCTATTGGCACTGCTCATGCACCGGGGTTTTAAATTTTCCATTACCAATTCCATAATGTGGCAGACAGCTGATCGACCACTGATGTGGAAGCAGTCGCCAGAACAACCAATCATTTTCCCTCATTGCCCCTACAAAGCAAAGGATATCACTACACCTATGGTTCAGTATCACCCCTGCTGCTACTGTGGGGTGAAAAGCAGCAGGGGCATGGTCAGGAAGCCGGGTCCCAAGCAAGGGAGCCTTTTCTTTGGATGTGGAAACTGGACTGCAACTAGAGGTGCCCGCTGCCATTACTTTGAATGGGCTTCTACCTAA 1245 0.4353 MMALENSENMQINCEASLKCLQGKGFPCNFQGNGSSTEGFTELKNEPGTHLAGDVAEPNCHIGSKFLEPSNEFHNKPTYHQNFSTWTPCHFNSHRVQQCQMNAFESHFYPYPVENQLQCVPINMVAQGYPREQYQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNSNFAVVTWSSWDCRVMLESECRFKKIRKPPYFNRWINLKIPFSEVFGAVRCNLKEAVEIAGLAWQGRAHCGLDDAKNTARLLALLMHRGFKFSITNSIMWQTADRPLMWKQSPEQPIIFPHCPYKAKDITTPMVQYHPCCYCGVKSSRGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWAST 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0268 414 Pfam Exonuclease 141 312 IPR013520 -
Ssu2g0268 414 Gene3D - 130 346 IPR036397 GO:0003676
Ssu2g0268 414 SMART exoiiiendus 139 321 IPR013520 -
Ssu2g0268 414 CDD ERI-1_3'hExo_like 140 316 - -
Ssu2g0268 414 PANTHER ERI1 EXORIBONUCLEASE 2-LIKE 1 413 - -
Ssu2g0268 414 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 1 413 - -
Ssu2g0268 414 SUPERFAMILY Ribonuclease H-like 137 326 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0268 Ssu-Chr2 16180091 16186606 Dispersed