Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0258 ATGATGTCTGGGTACGTTAGACGAGCATTCTCGTACCGGAACATGCTGTGGCTCCGAACCTCTGGTGCGGTTCGTGTTTGTGACGCGTCTCCCGTTAAAATTGGTGTGGCCGATAGCAACAGAGTGTTCACTCTTCCGGCAACGCCTAATTTTTCCGTGGAAAGTCGCAGAGCCTTTGCCAAAGGGCGAAAGTCAAAGGACGAAGGGGGTGTCAGTACAATTGAAGTTCCACCAAACGTTGGTCCTACTATTAAGGCAAATGCTGTCTCGCAGATGGAGGCTGCAATGGCTGCGTTATCAGCAGAACTAAACAAGCTACGAACAGGAAGGGCATCTCCAGGAATGCTTGATCATATTATTGTTGAAGCTAGTGGTTTGAAGATGCCTTTGAATCGGGTTGCTGTTGTTTCAGTCATAGATCTAAAAACCTTATCGGTTAATCCTTATGATCCACAGACACTTAAGCAATTAGAGAATGCCATTGTTTCATCTCCATTGGGGTTAAATCCTATATCAGATGGTGAAAGATTGATTGCTGTTATTCCACCATTGACCAAAGAGCATATGCAGGCTATGACTAAGTTGGTTGCTAAATCATGTGAAGATGCTCGTCAAAGTATTAGAAGAGCTCGGCAAAAGGCAATGGATGCAATAAAGAAGTTATATTCAAGTCTTCCCAAGGATGACATAAAAAGATTGGAGAAAGAAGTTGACGATTTGACCAAAAAATTTATCAAGAGTGCGGAAGATTTATGCAAGgcaaaagagaaggaaattagTCAAGGTTGA 789 0.4208 MMSGYVRRAFSYRNMLWLRTSGAVRVCDASPVKIGVADSNRVFTLPATPNFSVESRRAFAKGRKSKDEGGVSTIEVPPNVGPTIKANAVSQMEAAMAALSAELNKLRTGRASPGMLDHIIVEASGLKMPLNRVAVVSVIDLKTLSVNPYDPQTLKQLENAIVSSPLGLNPISDGERLIAVIPPLTKEHMQAMTKLVAKSCEDARQSIRRARQKAMDAIKKLYSSLPKDDIKRLEKEVDDLTKKFIKSAEDLCKAKEKEISQG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0258 262 Coils Coil 89 109 - -
Ssu2g0258 262 Coils Coil 200 220 - -
Ssu2g0258 262 SUPERFAMILY Ribosome recycling factor, RRF 84 259 IPR036191 -
Ssu2g0258 262 Coils Coil 230 250 - -
Ssu2g0258 262 Pfam Ribosome recycling factor 100 259 IPR023584 -
Ssu2g0258 262 PANTHER RIBOSOME RECYCLING FACTOR 2 261 IPR002661 GO:0006412
Ssu2g0258 262 CDD RRF 84 259 IPR002661 GO:0006412
Ssu2g0258 262 PANTHER OSJNBA0076N16.8 PROTEIN 2 261 - -
Ssu2g0258 262 Gene3D - 110 184 - -
Ssu2g0258 262 Gene3D - 90 259 IPR036191 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0258 Ssu-Chr2 15182783 15185842 Dispersed