Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu2g0227 | ATGTCTGAATTGGTGGCCCGAACGGGTCGGCTTCAGCAGCGGTACGAGAACGGTTATCGTCTTGTTGCTGGGTGTGTTCCATTTAGGTATAAATGTTCTAATGATTGTGGAGGCTCTAGTTCTGAGGAGAATATTGTTGAAGTTCTTATGATTAATTCACCAAGCGGACCAGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAGGCAGCTGTAAGGGAAGCTATAGAAGAAGCAGGAGTTCGAGGAGACCtaatgGATTTTCTTGGGTACTATGAATTTAGGAGTAAGACCCATCAAGATGAGTTCAGTCCAGAAGGTTTATGTAAAGCAGCAATGTTTGCCTTGTTTGTGAAGGAGGAACTTGAGTTATGGCCTGAGCAAAGTACCAGAAATAGGAGGTGGCTAGCTGTATCAGAGGCACTTGAAAGCCTCCGGCATGCATGGATGAGGGATGCTCTGGAACACTTCTGTAAATGGCACGAGGATAAGTTGGTGAGTTGA | 519 | 0.4509 | MSELVARTGRLQQRYENGYRLVAGCVPFRYKCSNDCGGSSSEENIVEVLMINSPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGDLMDFLGYYEFRSKTHQDEFSPEGLCKAAMFALFVKEELELWPEQSTRNRRWLAVSEALESLRHAWMRDALEHFCKWHEDKLVS | 172 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu2g0227 | 172 | ProSiteProfiles | Nudix hydrolase domain profile. | 18 | 163 | IPR000086 | - | |
| Ssu2g0227 | 172 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 5 | 164 | - | - | |
| Ssu2g0227 | 172 | Pfam | NUDIX domain | 48 | 162 | IPR000086 | - | |
| Ssu2g0227 | 172 | CDD | Nudix_Hydrolase_9 | 21 | 156 | - | - | |
| Ssu2g0227 | 172 | ProSitePatterns | Nudix box signature. | 64 | 85 | IPR020084 | GO:0016787 | |
| Ssu2g0227 | 172 | SUPERFAMILY | Nudix | 11 | 165 | IPR015797 | - | |
| Ssu2g0227 | 172 | PANTHER | DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE | 1 | 171 | - | - | |
| Ssu2g0227 | 172 | PANTHER | OS03G0810300 PROTEIN | 1 | 171 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu2g0227 | Ssu-Chr2 | 13250237 | 13254079 | Dispersed/Wgd |