Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0226 atggaggaggaggaggagaaagaagaaaccAACCAAGACCCTAACAACAGCCACCCTTCTTCTCTGCCCCCAATCAAGGAAGAGTGTGCTGTGAGGAAACCCTTTGGCGGGGGTGACAGAGTGAAGAGAGATGAGTGGAGTGAAGGGGCAGTGTCGACCCTCCTCGAGGCCTACGAGGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCACGACTGGGAGGACGTGGCGCGGCACGTGTCGTCACGTGCCAACTGCACCAAGTCACCCAAGACTTCAACGCAGTGTAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAATCAGCAGCCGCAGATCATGCATCGTCTTGGCCTCTATATTCGAGGCTCGATCTTCTTCTCAGGGGAACTGGGCCGGTCTTGTCGTCGACGCCGCTGGCACCGGCGCCGCCGCAGTCGCCGGTGGAGCAGTCGCAACCGCCGCAGCAGTCGCCGCCTCCGGGCGATCCTTCAGGGCCGCTTGCTAATGCGCAAAACTCGCATGGATCCGATGGGGTTGATGATAAACTGGCCAAGGAAGATGGGTTAGCAACAAAGTCATCTGACCATGTATCTAGCAAGAATCCATTGGACACGGATAGCAGCACGCCTGCACTTTATAGCAAGAAGGACGAGTTGAGATGTaacaagaggaagaagaaattaattgaCAACACGGGGCGAAGAAGGAATGTGGAGATAGCAGAAAGCTTGAGATGGCTAGCAGAAGCTATGGTAAGGTCAGAACAAGCAAGAATGGACACAATGAAGGAAATAGAGAGGATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGACCTTAAGAGAACTGAAATAATTGCCAATACACAATTAGAGATTGCTAGGATCTTTGCTAGTGTCAACAAAGGTGTTGATTCGTCGCTTAGAATTGGAAGAAGTTAA 960 0.4948 MEEEEEKEETNQDPNNSHPSSLPPIKEECAVRKPFGGGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSSRANCTKSPKTSTQCKNKVESMKKRYRSESAAADHASSWPLYSRLDLLLRGTGPVLSSTPLAPAPPQSPVEQSQPPQQSPPPGDPSGPLANAQNSHGSDGVDDKLAKEDGLATKSSDHVSSKNPLDTDSSTPALYSKKDELRCNKRKKKLIDNTGRRRNVEIAESLRWLAEAMVRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0226 319 MobiDBLite consensus disorder prediction 183 198 - -
Ssu2g0226 319 MobiDBLite consensus disorder prediction 139 223 - -
Ssu2g0226 319 MobiDBLite consensus disorder prediction 142 170 - -
Ssu2g0226 319 MobiDBLite consensus disorder prediction 199 215 - -
Ssu2g0226 319 Gene3D - 46 111 - -
Ssu2g0226 319 Pfam Myb/SANT-like DNA-binding domain 43 130 IPR044822 -
Ssu2g0226 319 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 315 IPR044823 -
Ssu2g0226 319 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 20 315 - -
Ssu2g0226 319 MobiDBLite consensus disorder prediction 85 99 - -
Ssu2g0226 319 MobiDBLite consensus disorder prediction 85 104 - -
Ssu2g0226 319 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0226 Ssu-Chr2 13181269 13185468 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ssu2g0226 Myb_DNA-bind_4 2e-19 CL0123