Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0206 ATGACGGCTTCTTCTTCTACTTCTTTGGTCGTTCTTGGGTCACTCCACCTTACTCCACAGAACGGTTACAAAGTGTGGGAAGATCCATCTTTCATCAAGTGGAGGAAAAGGGACCCTCATGTTACCTTGCACTGCCATGACTCTCTTGAAGGATCTCTTAAATATTGGTATCAACGCAACAAAGTGGATTTTTTGGTTTCCCAGTCTGCTGTTTGGAATGATGATGCTGTTCAGGGTTCTCTTGATTGTGCTGCATTTTGGGTCAGAGATTTGCCTTTTGTTAAGTCCTTGTCTGGCTATTGGAAATTTTTCATTGCTGACAATCCCAACAATGTCCCtactaatttttatgaaagtgaGTTCCAGGATTCAGAGTGGAAAGCTTTGCCTGTTCCTTCAAATTGGCAGTTACATGGATTTGACGTTCCTATATATTCGAATGTGGCTTATCCATTTCCACTAGATCCTCCTTTCGTTCCTGTGGAAAATCCTACTGGCTGTTACAGAACGTACTTCCACATTCCTAAAGAATGGGAGGGTAGAagaattttgttgcattttgaaGCAGTTGATTCTGCCTTTTGTGCATGGATAAATGGGCATCCTGTAGGATATAGCCAAGACAGCAGACTACCTGCAGAGTTTGAAATCACTGATTTTTGCCATCCATGTGGTTCAGACATCCAGAATGTTTTAGCAGTTCAAGTGTTTAGATGGAGTGATGGCTCTTACCTTGAAGACCAGGACCAATGGCGGTTATCTGGTATCCACCGTGATGTTCTTCTTATGGCAAAGCCAGAGGTATTCATTACCgactattttttcaaatcaagCCTCGCCGAAGATTTTTCTTACGCAGAGATGCTGGTTGaagtaaaaatagataaattacgAGAGACATCCAAGGATAATGTTCTTACAAACTACTCTATAGAAGCTACATTGTTTGATTCTGGAAGCTGGTACACCTCTGACGGGAATCCTGATCTCCTCTCATCTAATGTGGCAGACATAAAGCTCCAACCGTCAAGTGCACCACCATTAGGGTTTCATGGTTATGTGTTTGTGGGGAAACTGCAATCGCCAAAGCTTTGGTCCGCAGAGAACCCATACCTCTATACCCTAGTTGTTGTCCTGAAAGATCAATCTGGCCGTGTTCTTGACTGTGAATCTTGTCCAGTAGGATTTAGAAAAGTATCTAAAGCCCACAAACAGCTGCTTGTTAATGGACATGCTGTTGTAATAAGAGGTGTGAACAGGCATGAGCATCATCCACAAGTGGGGAAGGCAAACATAGAATCCTGCATGATCAAGGATTTGGTCTTAATGAAGCAAAACAATATTAATGCTGTGAGGAACAGTCATTATCCCCAACATCCACGTTGGTATGAGCTATGTGATCTGTTTGGCATGTACATGATAGATGAAGCCAATATTGAGACACATGGTTTTGATGATTCTATACATCTCAAGCATCCTACTAAGGAACCAAAGTGGGCAACTGCAATGCTGGATCGTGTGATCGGCATGgttgagagagataaaaatcaCCCATGCATTATCTCCTGGTCTTTAGGGAATGAATCTGGATTTGGAACAAATCATTTTGCTTTAGCTGGTTGGATTCGAGGAAGAGATTCATCGCGAGTATTACATTATGAAGGAGGTGGATCCAGGACCCCATGCACTGATATTGTGTGTCCTATGTATATGCGTGTTTGGGACATGGTGAAAATTGCCAATGATCCAACTGAAACACGACCTCTGATACTGTGCGAGTATTCACATGCAATGGGAAACAGTAACggaaatatacatttatattggGAAGCAATTGACAACATATTTGGACTCCAAGGAGGCTTTATTTGGGATTGGGTTGATCAGGCCCTGGTGAAAGTTTATGCCGATGGTACAAAGCATTGGGCATATGGAGGTGAATTCGGGGATGTTCCTAATGACTCTAATTTCTGTTTGAATGGCCTCACATTTCCAGATCGAACTCCTCATCCTGTTTTACATGAGGTTAAGTACTTATACCAACCAATCAAGGTGACCTTAAATGAAGTGAAATTGGAGataaaaaatactcatttttttcaaacaacaGAAGGATTGGAGTTCAGCTGGTCTATTTCTGCAGATGGATACAACCTTGGATCTGGTATTTTGGACCTTGCCCCTATTAAGCCCCAGAGTAGTTATGCTGTTGATTGGCAATCAGGCCCATGGTATTCTCAGTGGACTTCATCATCATCAGAAGAACTATTCCTGACTATAACGGCTAAACTTTTGAACTGCACGCGCTGGGTTGAAGCTGGTCATATTGTTTCATCTGCTCAAGTTCAACTACCTTCCAGGAGAGACATTGTTcctcatGCTATCAGTATTAGTGGTGGCACTTTGGTTGCTGAAACACTAGGAGATACAATCAAAGTCAGCCAGCAAGATGTTTGGGACATAACATTGAACACTAAAACAGGTTTAGTTGAAAGCTGGAAGGTTAAAGGAGTGCATGTTATGAAAAAGGGCATCCTCCCATGTTTCTGGCGAGCTCCTATTGATAATGATAAAGGAGGAGGACCAGTCAGTTATTTGTCCAGGTGGAAAGCTGCTGGAATGGACTGCCTCCACTTTATTACTGAGAGCTGTTCTGTGCAAAATATGACAGAGAACACAGTTAGAATATTGGTGGTCTTTCTTGGTGTTGCCAAGGGTGAGGAGGGTTCTCTCTCTAACCAAGGCAAGTCAAAGGTTTTATTTACAACAGAAATGACATATACAATTTATGCTTCTGGGGATGTCATTATAGAGTGCAATGTTAAACCAAACCCTGATCTTCCTCCTTTGCCGCGTGTGGGAATTGAGTTAAATGTTGAAAAGTCTTTAGATCAAGTAACTTGGTATGGAAGAGGACCATTTGAGTGTTATCCAGATCGAAAAGCTGCTGCCCAGGTTTCAATCTATGAACATAATGTTAGTGAGTTGCATGTTCCTTACATTGTTCCTGGGGAATCTTCAGGTAGGGCAGATGTTAGATGGGCAACATTCAGAAACAAAAATGGTTTTGGAATATATGCTTCTAAGTATGGTAGCTCTCCACCCATGCAAATGAATGCAAGCTACTATAGCACCTCGGAACTTGACCGTGCCACACACAATGAAGAGCTCATTGAAGGAGATAGCATTGAGATTCATCTGGATCACAAGCACATGGGATTGGGGGGAGATGATAGTTGGTCGCCAACTGTCCATGAACAGTATTTGATTCATCCTGTCTCATATTTATTCTCTGTAAGGTTGTGTCCAGTAACTCCAGCCACTTCTGGTTATGACATCTACAAATCCCAGTTTCAAAACTCTTGA 3366 0.4073 MTASSSTSLVVLGSLHLTPQNGYKVWEDPSFIKWRKRDPHVTLHCHDSLEGSLKYWYQRNKVDFLVSQSAVWNDDAVQGSLDCAAFWVRDLPFVKSLSGYWKFFIADNPNNVPTNFYESEFQDSEWKALPVPSNWQLHGFDVPIYSNVAYPFPLDPPFVPVENPTGCYRTYFHIPKEWEGRRILLHFEAVDSAFCAWINGHPVGYSQDSRLPAEFEITDFCHPCGSDIQNVLAVQVFRWSDGSYLEDQDQWRLSGIHRDVLLMAKPEVFITDYFFKSSLAEDFSYAEMLVEVKIDKLRETSKDNVLTNYSIEATLFDSGSWYTSDGNPDLLSSNVADIKLQPSSAPPLGFHGYVFVGKLQSPKLWSAENPYLYTLVVVLKDQSGRVLDCESCPVGFRKVSKAHKQLLVNGHAVVIRGVNRHEHHPQVGKANIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDDSIHLKHPTKEPKWATAMLDRVIGMVERDKNHPCIISWSLGNESGFGTNHFALAGWIRGRDSSRVLHYEGGGSRTPCTDIVCPMYMRVWDMVKIANDPTETRPLILCEYSHAMGNSNGNIHLYWEAIDNIFGLQGGFIWDWVDQALVKVYADGTKHWAYGGEFGDVPNDSNFCLNGLTFPDRTPHPVLHEVKYLYQPIKVTLNEVKLEIKNTHFFQTTEGLEFSWSISADGYNLGSGILDLAPIKPQSSYAVDWQSGPWYSQWTSSSSEELFLTITAKLLNCTRWVEAGHIVSSAQVQLPSRRDIVPHAISISGGTLVAETLGDTIKVSQQDVWDITLNTKTGLVESWKVKGVHVMKKGILPCFWRAPIDNDKGGGPVSYLSRWKAAGMDCLHFITESCSVQNMTENTVRILVVFLGVAKGEEGSLSNQGKSKVLFTTEMTYTIYASGDVIIECNVKPNPDLPPLPRVGIELNVEKSLDQVTWYGRGPFECYPDRKAAAQVSIYEHNVSELHVPYIVPGESSGRADVRWATFRNKNGFGIYASKYGSSPPMQMNASYYSTSELDRATHNEELIEGDSIEIHLDHKHMGLGGDDSWSPTVHEQYLIHPVSYLFSVRLCPVTPATSGYDIYKSQFQNS 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0206 1121 Pfam Beta galactosidase small chain 817 1101 IPR004199 GO:0004565|GO:0005975|GO:0009341
Ssu2g0206 1121 PANTHER BETA-GALACTOSIDASE 12 1106 - -
Ssu2g0206 1121 Pfam Glycosyl hydrolases family 2, TIM barrel domain 403 684 IPR006103 GO:0004553|GO:0005975
Ssu2g0206 1121 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 449 474 IPR023230 -
Ssu2g0206 1121 Pfam Glycosyl hydrolases family 2, sugar binding domain 95 266 IPR006104 GO:0004553|GO:0005975
Ssu2g0206 1121 PRINTS Glycosyl hydrolase family 2 signature 190 205 IPR006101 GO:0004553|GO:0005975
Ssu2g0206 1121 PRINTS Glycosyl hydrolase family 2 signature 408 422 IPR006101 GO:0004553|GO:0005975
Ssu2g0206 1121 PRINTS Glycosyl hydrolase family 2 signature 439 457 IPR006101 GO:0004553|GO:0005975
Ssu2g0206 1121 PRINTS Glycosyl hydrolase family 2 signature 514 529 IPR006101 GO:0004553|GO:0005975
Ssu2g0206 1121 PRINTS Glycosyl hydrolase family 2 signature 587 602 IPR006101 GO:0004553|GO:0005975
Ssu2g0206 1121 SUPERFAMILY beta-Galactosidase/glucuronidase domain 677 786 IPR036156 -
Ssu2g0206 1121 SMART Bgal_small_N_2 812 1102 IPR004199 GO:0004565|GO:0005975|GO:0009341
Ssu2g0206 1121 SUPERFAMILY (Trans)glycosidases 402 681 IPR017853 -
Ssu2g0206 1121 ProSitePatterns Glycosyl hydrolases family 2 acid/base catalyst. 514 528 IPR023232 -
Ssu2g0206 1121 Gene3D Immunoglobulins 267 397 IPR013783 -
Ssu2g0206 1121 Pfam Glycosyl hydrolases family 2 268 397 IPR006102 GO:0004553|GO:0005975
Ssu2g0206 1121 Pfam Beta-galactosidase, domain 4 692 785 IPR032312 -
Ssu2g0206 1121 Gene3D Glycosidases 399 679 - -
Ssu2g0206 1121 PANTHER GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN 12 1106 - -
Ssu2g0206 1121 Gene3D Immunoglobulins 681 789 IPR013783 -
Ssu2g0206 1121 SUPERFAMILY Galactose mutarotase-like 808 1104 IPR011013 GO:0003824|GO:0005975|GO:0030246
Ssu2g0206 1121 SUPERFAMILY Galactose-binding domain-like 94 266 IPR008979 -
Ssu2g0206 1121 Gene3D - 802 1103 IPR014718 GO:0030246
Ssu2g0206 1121 SUPERFAMILY beta-Galactosidase/glucuronidase domain 268 397 IPR036156 -
Ssu2g0206 1121 Gene3D - 15 266 - -