Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu2g0181 | ATGATGTACAATGATCCTCAGCACCAGCACCAGtaccagcaacaacaacaacagcagcagcagcagcagcattTTCACCACCAGCCGCCGGGTCCCGAGTTCCACCGCGGACCGCCGCCACCGTCGCAGCCGCCGCTGGTGATGCGGCAAGGGTCCGCCTCGTCGACGAACCTCGCCCCCGAGTTTCACCACCCTGGCCCCGGAGGACCCGTTCCTCCTCATTACGATGTTCACAGCGATAGCCATGGTGCAAAAAGAATACGAAAGCTTACTCAAAGGAAGGCAGTTGATTATACAAGCACAGTTGTGCGTTATATGCAGATTCGTATGTGGCAGCGGGATTCAAGGGATAGGACAGTACTGCAACCAACCCCAGCAGCAGCAATTGATATGTTGCCAGCTGTTGGCTATCCAGACAATCCATCTACAAGCTTTGCTGCTAAATTTGTTCATACATCGCTAAATAAAAATCGTTGCCCCATTAATCGCGTTCTTtggACTCCAACAGGCCGGCGTCTTATTACTGGCTCACAGACTGGGGAATTCACTCTTTGGAATGGccaatcttttaattttgaaatgattcTTCAGGCTCATGATCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGGGGTGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGTAGGACAGATTTGAAGTTCTGTTCGTGTTCTGATGATACCACAGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTGTTCACTAACTGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCCCTATTAGACAATCTTGTGAAACTTTGGGATGCTAAAACAGGGAGAGAGCTTTGCTCATTTCATGGCCACAAAAATACTGTGCTGTGTGTCAAATGGAATCAAAATGGCAACTGGGTGTTAACAGCTTCAAAGGATCAAATAATAAAGCTTTATGACATAAGAGCAATGAAGGAGCTTGAATCATTCCGTGGACATCGCAAGGATGTTACTGTTCCATATTATGGTGTTTATAATATTCTCAATGGCACTGGCTCAAGGCATGAAACTCCACAAATTGAAATTCCCAATGCTCATGATAATAATGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTGTGCAGTTACATAAAATTTCCTGAAATCTTTTTTGGTAGACATTGTATTCCTCTAATTGATCTGTTGATATCTAAAGAAAGACCATTTGCCCCTGGGTTAACTCGAAATGAGGGTACCATTCCAGGGGTTGGAGTTGCAATGCCCTTATCTATTCCTTCTCTTGACATGCCTCAAGGGGAGCAGAAGCAGCCCCATCCTGTTTCAATGGGTGCTCCTCCTCTTCCCCAGGCTCTACCACCGCAGATGGGTCCTTTGCCTATACCTCCAAATATGCCACAACTACAGCACCCTTCCCATTCACCCTTGGTCCCTCACCAGCATTTGCCTCGCCCTCCACCCCAAATGCCTATTGGCATGCCAGGATCTCTACCAGGGATTTCGTCAGTGCCTACGTCACATCCAATGCCAATGCCAGGTCCAATGGGGATGCAAGGGGCGATGAATCAGATGGGTACTCCAATGCCACAAGGTCCTTATGTGGGCATGAATCAAATGCATTCAGGATCCTTGCCTACAAGTGGAGGGCCGCCTCTTGGTGGTTTTCCAAGCAACTTGCCTAATATGCAAGGGCCATCAAATGCCAATTATCCTCAAGGTGCTTCATTTAACAGACCTCAAGGTGGCCAAATGCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGTAATCAGTCTGGGATGCCTCCAAGCGCACAACCAGGGGCTTCTCACTCTCAAATGCCTCCATAG | 1962 | 0.4557 | MMYNDPQHQHQYQQQQQQQQQQQHFHHQPPGPEFHRGPPPPSQPPLVMRQGSASSTNLAPEFHHPGPGGPVPPHYDVHSDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTVPYYGVYNILNGTGSRHETPQIEIPNAHDNNVWDLAWHPIGYLLCSYIKFPEIFFGRHCIPLIDLLISKERPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPQALPPQMGPLPIPPNMPQLQHPSHSPLVPHQHLPRPPPQMPIGMPGSLPGISSVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPSNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPSAQPGASHSQMPP | 653 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu2g0181 | 653 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 196 | 228 | - | - | |
| Ssu2g0181 | 653 | Pfam | WD domain, G-beta repeat | 239 | 270 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | Pfam | WD domain, G-beta repeat | 312 | 349 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | Pfam | WD domain, G-beta repeat | 194 | 227 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | CDD | WD40 | 158 | 413 | - | - | |
| Ssu2g0181 | 653 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 317 | 358 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | SUPERFAMILY | WD40 repeat-like | 150 | 413 | IPR036322 | GO:0005515 | |
| Ssu2g0181 | 653 | MobiDBLite | consensus disorder prediction | 467 | 494 | - | - | |
| Ssu2g0181 | 653 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 196 | 228 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - | |
| Ssu2g0181 | 653 | MobiDBLite | consensus disorder prediction | 479 | 494 | - | - | |
| Ssu2g0181 | 653 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 154 | 186 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | MobiDBLite | consensus disorder prediction | 579 | 653 | - | - | |
| Ssu2g0181 | 653 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - | |
| Ssu2g0181 | 653 | SMART | WD40_4 | 310 | 349 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | SMART | WD40_4 | 273 | 307 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | SMART | WD40_4 | 142 | 186 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | SMART | WD40_4 | 189 | 228 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | SMART | WD40_4 | 231 | 270 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | MobiDBLite | consensus disorder prediction | 596 | 653 | - | - | |
| Ssu2g0181 | 653 | PANTHER | WD40 REPEAT PROTEIN | 76 | 413 | IPR045245 | GO:0031124 | |
| Ssu2g0181 | 653 | Gene3D | - | 136 | 415 | IPR015943 | GO:0005515 | |
| Ssu2g0181 | 653 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Ssu2g0181 | 653 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 238 | 270 | - | - | |
| Ssu2g0181 | 653 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 238 | 270 | IPR001680 | GO:0005515 | |
| Ssu2g0181 | 653 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 317 | 351 | - | - |