Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0168 ATGGCTACCCTTATTGCTCCCAGCAACCATTCTCCCCAAGAAGATGCTGAAGCCCTCAGAAAGGCTTTTGAAGGTTGGGGAACTGATGAGAAGAGTATCACAGTAATACTGGGTCATAGAAATGTTTATCAGAGGCAGCAAATCAGAAGAGTCTATGAGGAAATTTACCAGGAGGATCTTGTGAAACGCCTAGAGTCTGAGATCAAAGGAGACTTTGAGAAAGCTGTGTACCGATGGATCCTGGAACCTGCAGATCGTGATGCTGTTTTGGCCCATGTTGCCATCAAGAATGGCAAAAACTACAATGTCGTTGTGGAGATTGCCACTATCCTCTCCCCTGAAGAGCTCTTTGCCGTGAGGCGCGCTTATCTCCACCGCTACAAGCACTCCTTGGAAGAAGATGTGGCTGCTCATACCACTGGCCATCTACGCCAGCTTTTAGTAGGGCTGGCGACCTCATTCAGGTATGTTGGTGATGAGATCAATCCAAGATTGGCACAAACTGAGGCTGAAATTCTTCATGATGCTGTGAAAGAGAAGAAGGGTAGTTATGAAGAGGCCATCAGGGTCCTGACTACAAGGAGCAAGACCCAACTGGTTGCAACTTTCAACCGCTACAGAGAGATCCATGGCACTTCCATCAGTAAGAAACTGGTGGATGAAGGATCTGATGAGTTTCAGAAGGCATTGTACACTGCCATTCGTTCCATTAATGATCATATTAAGTACTATGAAAAGGTGGTGCGCAATTCAATCAAAAAGGTTGGAACTGATGAGGATGCACTCACTCGTGTGTTTGTGAGCCGGGCTGAGAAGGACCTGAAGTTCATCTCAGAGGTTTATTACAAGAGAAACAGTGTTCTTCTTGAGCATGCTGTGGCCAAGGAAACCTCAGGGGACTACAAGAACTTCCTTCTCACTCTGTTGGGAAAAGAAggctaa 942 0.4597 MATLIAPSNHSPQEDAEALRKAFEGWGTDEKSITVILGHRNVYQRQQIRRVYEEIYQEDLVKRLESEIKGDFEKAVYRWILEPADRDAVLAHVAIKNGKNYNVVVEIATILSPEELFAVRRAYLHRYKHSLEEDVAAHTTGHLRQLLVGLATSFRYVGDEINPRLAQTEAEILHDAVKEKKGSYEEAIRVLTTRSKTQLVATFNRYREIHGTSISKKLVDEGSDEFQKALYTAIRSINDHIKYYEKVVRNSIKKVGTDEDALTRVFVSRAEKDLKFISEVYYKRNSVLLEHAVAKETSGDYKNFLLTLLGKEG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0168 313 SUPERFAMILY Annexin 3 312 IPR037104 GO:0005509|GO:0005544
Ssu2g0168 313 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Ssu2g0168 313 Gene3D Annexin 241 312 IPR037104 GO:0005509|GO:0005544
Ssu2g0168 313 ProSiteProfiles Annexin repeat profile. 164 235 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 PANTHER ANNEXIN 7 312 - -
Ssu2g0168 313 ProSiteProfiles Annexin repeat profile. 82 152 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 ProSiteProfiles Annexin repeat profile. 239 310 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 PANTHER ANNEXIN 7 312 - -
Ssu2g0168 313 Gene3D Annexin 82 151 IPR037104 GO:0005509|GO:0005544
Ssu2g0168 313 Pfam Annexin 169 230 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 Pfam Annexin 247 308 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 Pfam Annexin 87 150 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 Gene3D Annexin 164 238 IPR037104 GO:0005509|GO:0005544
Ssu2g0168 313 PRINTS Plant annexin signature 224 242 IPR009118 -
Ssu2g0168 313 PRINTS Plant annexin signature 159 179 IPR009118 -
Ssu2g0168 313 PRINTS Plant annexin signature 117 131 IPR009118 -
Ssu2g0168 313 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Ssu2g0168 313 PRINTS Annexin family signature 296 309 IPR001464 GO:0005509|GO:0005544
Ssu2g0168 313 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Ssu2g0168 313 PRINTS Annexin family signature 252 272 IPR001464 GO:0005509|GO:0005544
Ssu2g0168 313 SMART annex3 98 150 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 SMART annex3 256 308 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 SMART annex3 182 233 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Ssu2g0168 313 ProSitePatterns Annexin repeat signature. 256 308 IPR018252 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0168 Ssu-Chr2 8630663 8633041 Tandem