Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0167 ATGGCTACTCTTGTTGCTCCTAGGAATCATTCTCCACAGGAAGATGCAGAAGCTCTCTGGAAGGCCGTCAAAGGATGGGGGACAGATGAAAAGACCATAATCGAAATACTGGGTCATAGAAATGCTTCTCAGAGGCAGCAAATTAGACAAGCTTTCCATGACATTCACCAAGAGGATCTCATCAAACGCCTCGAGTCTGAGCTCTCTGGTGACTTTGAGAGAGCTGCATTCCGGTGGACATTAGAACCTGCAGAACGTTATGCTGTGTTGGCCAACGttgctataaatttttttaacaaagattACCATGTGATTGTGGACATTGCATGTGTGCTTCATCCTGAAGAGCTTTTGGGTATGAGGCGAGCCTACCACAACCGCTACAAGCATTCTTTAGAAGAAGATGTGGCTGCTCATACCACTGGCCATCTTCGTCAGGCAAGTCATTCTTCCTGGTCAATATATGTGATCAATGCAAGATTGGCAAAATCTGAAGCTAATATTCTTCAAGAGGCTACCAAAGACAAGAAAGGTTACCATGAAGAAGTTATTAGGATCCTTAGTACAAGGAGCAAGACCCAACTTGTGGCAACTTTCAACAGCTACAAAGGTGAAAATGGCATTTCCGTTAGCAAGAAACTGTTGGAGGAAACATCTGATGACTTCCATAAGGCCGTGCATGTTGCCATTCATTGCATCAATGATCACAGGAAGTACTATGAAAAGGTTCTGCGCAATGCAATAAAAGGGGTTGGAACTAATGAGGATGGACTAACTCGTGTGTTTGTCACAAGGGCTGAGAAGGACCTGAAGGAATCAAAGAgctatattataagaaaaataGAGTTTTCCATCTAA 858 0.4207 MATLVAPRNHSPQEDAEALWKAVKGWGTDEKTIIEILGHRNASQRQQIRQAFHDIHQEDLIKRLESELSGDFERAAFRWTLEPAERYAVLANVAINFFNKDYHVIVDIACVLHPEELLGMRRAYHNRYKHSLEEDVAAHTTGHLRQASHSSWSIYVINARLAKSEANILQEATKDKKGYHEEVIRILSTRSKTQLVATFNSYKGENGISVSKKLLEETSDDFHKAVHVAIHCINDHRKYYEKVLRNAIKGVGTNEDGLTRVFVTRAEKDLKESKSYIIRKIEFSI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0167 285 PANTHER ANNEXIN 7 276 - -
Ssu2g0167 285 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Ssu2g0167 285 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Ssu2g0167 285 PRINTS Annexin family signature 248 268 IPR001464 GO:0005509|GO:0005544
Ssu2g0167 285 Pfam Annexin 15 75 IPR018502 GO:0005509|GO:0005544
Ssu2g0167 285 Pfam Annexin 94 147 IPR018502 GO:0005509|GO:0005544
Ssu2g0167 285 Pfam Annexin 166 227 IPR018502 GO:0005509|GO:0005544
Ssu2g0167 285 PANTHER ANNEXIN 7 276 - -
Ssu2g0167 285 SMART annex3 172 230 IPR018502 GO:0005509|GO:0005544
Ssu2g0167 285 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Ssu2g0167 285 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Ssu2g0167 285 Gene3D Annexin 82 150 IPR037104 GO:0005509|GO:0005544
Ssu2g0167 285 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Ssu2g0167 285 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Ssu2g0167 285 Gene3D Annexin 160 234 IPR037104 GO:0005509|GO:0005544
Ssu2g0167 285 Gene3D Annexin 237 276 IPR037104 GO:0005509|GO:0005544
Ssu2g0167 285 SUPERFAMILY Annexin 3 274 IPR037104 GO:0005509|GO:0005544
Ssu2g0167 285 ProSiteProfiles Annexin repeat profile. 160 231 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0167 Ssu-Chr2 8609202 8615375 Proximal