Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0075 ATGGCTCAGTGGCAGGGTGATGCGGATGAGGGTATCGACTACATGTTCAAGATTGTGATGATTGGGGACTCGGGGGTTGGAAAGTCTCAGCTTTTGAATCGGTTTGTGAAAAATGAATTCCACATGAAATCAAAACCCACAATTGGGGTGGAGTTTCTGACCAGGACGGTCGTCATGGATCACAAACTAGTCAAGGCACAGATTTGGGACACTGCTGGTCAAGAAAGGTACCAGGCAATTACAACCGCGTATTACAGGGGTGCAACCGGCGCGTTACTAGCATACGACATAACCAGGCAGCAAACCTTTGACCATGTTGAAAAGTGGTTGGATGAGCTACGGATACACgcagataaaaatataatggtcATGCTTGTTGGCAACAAATCTGACCTGAGTTCTAATCGAGCAGTGCCTATTGAGGTAGCCAGAGACTTTGCGCAGCAGGAGGGTCTTTTCTTTCTTGAGACATCAGCACTTGACTCTAGCAATGTGGAATCAGCTTTCCTTGGTCTCCTCTCTCAAGTATATAAAACAGTCAGTAACAAGCATATCATTGTGGATGGACCTGAATCAAATTGGGATAGAGTAAACCTTGAAGGAACAAAAATTAAGGTCCCATTGCAAGAACCTGAATGCCAGAATGCTAAAAAGAGATTCACTTGTTGCAGTGTTCTTTAG 681 0.4361 MAQWQGDADEGIDYMFKIVMIGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITRQQTFDHVEKWLDELRIHADKNIMVMLVGNKSDLSSNRAVPIEVARDFAQQEGLFFLETSALDSSNVESAFLGLLSQVYKTVSNKHIIVDGPESNWDRVNLEGTKIKVPLQEPECQNAKKRFTCCSVL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0075 226 SMART ras_sub_4 16 179 - -
Ssu2g0075 226 Pfam Ras family 17 177 IPR001806 GO:0003924|GO:0005525
Ssu2g0075 226 Gene3D - 9 223 IPR027417 -
Ssu2g0075 226 SMART rab_sub_5 16 179 - -
Ssu2g0075 226 PANTHER RAB GTPASE-LIKE PROTEIN G3A 1 224 - -
Ssu2g0075 226 ProSiteProfiles small GTPase Rho family profile. 9 185 - -
Ssu2g0075 226 CDD Rab11_like 13 177 - -
Ssu2g0075 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 184 IPR027417 -
Ssu2g0075 226 SMART rho_sub_3 18 179 IPR001806 GO:0003924|GO:0005525
Ssu2g0075 226 SMART ran_sub_2 21 226 - -
Ssu2g0075 226 ProSiteProfiles small GTPase Rab1 family profile. 11 223 - -
Ssu2g0075 226 PANTHER - 1 224 - -
Ssu2g0075 226 TIGRFAM small_GTP: small GTP-binding protein domain 14 169 IPR005225 GO:0005525
Ssu2g0075 226 PRINTS Transforming protein P21 ras signature 119 132 - -
Ssu2g0075 226 PRINTS Transforming protein P21 ras signature 16 37 - -
Ssu2g0075 226 PRINTS Transforming protein P21 ras signature 39 55 - -
Ssu2g0075 226 PRINTS Transforming protein P21 ras signature 154 176 - -
Ssu2g0075 226 PRINTS Transforming protein P21 ras signature 57 79 - -
Ssu2g0075 226 ProSiteProfiles small GTPase Ras family profile. 10 226 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0075 Ssu-Chr2 6193574 6195094 Wgd