Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0011 ATGGGTGCTGTTTGTTGTGTTGCAAGCAAAGATAAAACTATACAAAGTGCATCACCCAGTGAAATCTTGCATCGGAATATTCGATATTCTCCGACGTGGAACTTCCGGTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACTACCATAAATTGGTTTTCTAATGGTATTAGTGGGAATGATGTATTGGAGAATAAAAATGAATCCTCGTATGTATCGGAGGATGGAAGTCCGTTGCAGAATTATCAAACAAATAGATGGCAAAAATCCCCAATCTCTGAAGGAACTGCTAGAAACATGATAAATTCATCTTCTGATCAAACTATTTCAAGGAATGTCTCCACGAATGTGAGCATGGAACAGGTGAAGGAGTTGGCAGAATCATCAACAGTATCATGTCCGTATCCTACAAAACATCCACATTCATTGCCTTCTACTTCTTTGTCAGTATCTTCTCTGCCATCCCAAAGTCACCCACTTCCACCCAGTTCAACACCATCAAGGTGGCCCTGCCATTCCACAGGACAGCAACTATTGCAGCAAGTTTCTGATAGCCGAATCCTGGGATTTAAGACACCTAGCAACTTTCATGTATCTGAAGAGAAGGTCTTTCCTTCATGGAGCAATGAATCTGGTATGCACTCTAGTGGTGGATCTTCGGAAAATTGGTCTAGGTCTGGCTTTTCTGAGCTCACAGGCACTGCCCTCAAAGAAAGATGGTCATTTAATAGTGAGTCATTTGGATTTAATTGTGAAAGGCTGGTTAGATCCAGTAGTCAGTTTTCAAATTCTACAGTTGATTTGCAAACATGTGGTGTTTGCTCAAAACTTTTAACTGAGAAGTCTTCTTGGGGCACCCAAAAGATAATTGAAAGTAATGACCTTTCTGTAGTTTCTGTCCTTATCTGTGGACACGTTTATCATGCTGAATGCTTGGAGAGTTTGACACTTGAAATCAACAAGTATGATCCACCTTGCCCAGTTTGCACTTTTGGTGAGAAACATACTCTTAAGTTGTCTGAAAAGGCTCTGAAAGCTGAAATGGATTTGAAGGCTAGAAATAAGAAATCAAGGAACCGAATTGTGGACAGTGATATTGATGATGATTCTGTTGTGTACGAACATTTTAGAGATAAAGGGCGTCAAGGTAAAGGTCCTAGAATCGATTCTAGTTCCAGTGGGAGAAGGTCCAATGGGAAACCTTTTCTGAGGAGACACTTCTCATTTGGCTCAAGGAGTTCCAAAAGCATGTTAGATAATCAGCCAACCAGGAAGAAGGGCTTCTTTTGGGCAAAATCTAACAAGGAATAA 1311 0.4104 MGAVCCVASKDKTIQSASPSEILHRNIRYSPTWNFRWDHRGRVAGEDTTINWFSNGISGNDVLENKNESSYVSEDGSPLQNYQTNRWQKSPISEGTARNMINSSSDQTISRNVSTNVSMEQVKELAESSTVSCPYPTKHPHSLPSTSLSVSSLPSQSHPLPPSSTPSRWPCHSTGQQLLQQVSDSRILGFKTPSNFHVSEEKVFPSWSNESGMHSSGGSSENWSRSGFSELTGTALKERWSFNSESFGFNCERLVRSSSQFSNSTVDLQTCGVCSKLLTEKSSWGTQKIIESNDLSVVSVLICGHVYHAECLESLTLEINKYDPPCPVCTFGEKHTLKLSEKALKAEMDLKARNKKSRNRIVDSDIDDDSVVYEHFRDKGRQGKGPRIDSSSSGRRSNGKPFLRRHFSFGSRSSKSMLDNQPTRKKGFFWAKSNKE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0011 436 MobiDBLite consensus disorder prediction 128 172 - -
Ssu2g0011 436 ProSiteProfiles Zinc finger RING-type profile. 271 330 IPR001841 -
Ssu2g0011 436 PANTHER EXPRESSED PROTEIN 1 430 - -
Ssu2g0011 436 PANTHER BNAA09G43140D PROTEIN 1 430 - -
Ssu2g0011 436 SUPERFAMILY RING/U-box 270 330 - -
Ssu2g0011 436 MobiDBLite consensus disorder prediction 128 158 - -
Ssu2g0011 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 331 IPR013083 -
Ssu2g0011 436 SMART ring_2 271 329 IPR001841 -
Ssu2g0011 436 MobiDBLite consensus disorder prediction 377 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0011 Ssu-Chr2 865344 868178 Dispersed/Transposed