Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0009 ATGGCTATCCTCCTGGTCATTCTCTTGGCCTTGTCCTCCCCTTCACCCTTATTAGGCCTTGTTTCATCCTTCAATCCAAAAGACAACTTCCTCATTGATTGTGGTGCAGAAAATGCAGCCACCCTTCCTGATGGAAGACAATTCAAATCAGACCCTCAAGCCATCTCTTTCTTGCAAGCCAATGATGAGTATAAAGTCAAAGTAGATGATGGGAATGTCCCTTCCCCCATATACTCAAATGCAAGGATCTTCATTCAGGAAGCTAAGTACTCCTTCCATTTGGTCCAACCAGGATTTCATTGGATTCGCCTTCATTTCTACCCCATCAAAAACAACATCTTTGATCTTCAGAAGGCCACTTTCTCTGTCAACACAGATACCTATGTGTTTCTCCACAGCTTCAATGTTAACAACACTGACAAACCAATCCTCAAGGAGTACCTCATAAATGTAACTCAACCTCAATTCACCATGTCTTTCATTCCCTTGAAGAATTCAGCTGCATTCATCAATGCCATTGAAGTTGTTTCAGCTCCTGATAACCTGATCTTTGACACTGGCGCCTGCCTTTTCCCTGTTGGGCAGTTCGCCGGCCTCACAGCTTATGGTTTCCAGCCTGTTTACAGGGTCAACAATGGAGGGCCTCTCATCACCTCTTCAAATGACACCCTTGGAAGGACTTGGGAATCTGATGAGCCTTACCTCACAAACAAGAATTTGGCCAAGAGTGTCTCAGTGGCTACCACCTCGGTTAAGTTCCCCCAAGACAATCCAACAATTTCTCCTCTCATTGCTCCACAAACTGTGTATGCTTCTGCCACTGAGATGGGTGATGCTGGTGTTACTCAGCCAAACTTCAATGTCTCATGGAAATTTGATGTGGACACTTCTTTTAGCTACCTTGTTAGGTTGCATTTCTGTGACATTGTTAGCAAAGGGCTCAATCAACTCTACTTTAATGTCTATGTGAATGGGAAAATGGCAATCTCTAACTTGGATTTATCATCCCTCACTGGTGCCTTATCAACCCCATATTACAAAGACATTGTGGTCAATGCAACATTGATGTCTCAGGGAGTAACAGTTCAGGTTGGTCCAGCAAATGCTGATGGTGGAAATGCCAATGCCATTGTGAATGGTATAGAGGTCTTGAAGATGAGCAACTCTGTGAATAGTCTGGATGGAGAATTTGGGGTTGATGGAAGAAGTGTTAATGGTTCTAACCGTGGCACGGTGGCAGCAGTTGGATTTGCCATGATGTTTGGAGCCTTTGTTGGTCTTGGTGCTATGGTGATCAAGTGGCACAAGAGGCCTCAAGACTGGCAAAAGAGGAACAGCTTCTCTTCATGGTTGCTGCCTTTGCATGCTGGTGACACAAGCTTCATGAGCAGCAAGAACTCAATGGGAAAGAGCAACATCTTCTCCTCATCAATGGGTTTGGGCCGGTATTTCTCCTTCACGGAACTTCAGGAAGCAACCAAGAATTTTGACTCCAAGAGCATCATTGGTGTTGGTGGATTTGGCAATGTCTATTTGGAACAAGGCATCACAGAATTCCAGACTGAAATCCAAATGTTGTCCAAGCTCAGGCACAGGCACTTGGTGTCCTTGATTGGATACTGTGATGAGAATGATGAGATGATCCTGGTTTATGAGTACATGCCTAGTGGACATTTCAGAGAGCATCTTTATGGAAAGAACTTGCCTGCTCTCTCATGGAAGCAGAGGCTAGAGATCTGTATTGGAGCAGCTCGTGGTCTTCACTACCTTCACACCGGCACAGCTCAAGGCATCATTCACCGCGATGTTAAGACTACCAACATCTTGCTAGATGAGAATTTAACAGCCAAGGTTTCTGATTTTGGGCTTTCAAAGGATGCACCTATGGGGCAGGGTCATGTTAGCACTGCAGTGAAGGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCAGGAGGCAGCAACTGACAGAAAAGTCTGATGTGTACTCATTTGGGGTGGTCCTGCTTGAGGCACTATGTGCAAGGCCAGCCATCAACCCTCAGTTGCCCCGCGAACAAGTAAACTTGGCTGATTGGGCAATGCAATGGAAGAGGAAGGGCCTGCTTGACAAGATCATTGATCCTCTCCTTGTTGGTTCCATCAATCCTGAATCTATGAAGAAGTTTGCTGAGGCTGCTGAGAAATGCCTAGCTGATCATGGAGTGGATAGGCCTTCAATGGGAGATGTTTTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGGAAAGGCTGAGGATGAGCCCAAGACATCTGCAGCAGTCCCTACTGCAGCTGTTCCTACTTCACCTGTCCCACCAACACCTTCCACTCCTTCTGATGACCACCCGGCTGCAGGTCCGGAAGTGAATAATGCTTCAGCAGGAGTGCAATCTATTGATGACCATTCTGGCACTGCTATGTTTGCCCAGTTTAGCAATCTCAATGGCAGGGAGGTAATTGTAGAAGCAGGTTCAAAGAAATTGGCTAGTGGCAGGTAG 2532 0.4597 MAILLVILLALSSPSPLLGLVSSFNPKDNFLIDCGAENAATLPDGRQFKSDPQAISFLQANDEYKVKVDDGNVPSPIYSNARIFIQEAKYSFHLVQPGFHWIRLHFYPIKNNIFDLQKATFSVNTDTYVFLHSFNVNNTDKPILKEYLINVTQPQFTMSFIPLKNSAAFINAIEVVSAPDNLIFDTGACLFPVGQFAGLTAYGFQPVYRVNNGGPLITSSNDTLGRTWESDEPYLTNKNLAKSVSVATTSVKFPQDNPTISPLIAPQTVYASATEMGDAGVTQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNQLYFNVYVNGKMAISNLDLSSLTGALSTPYYKDIVVNATLMSQGVTVQVGPANADGGNANAIVNGIEVLKMSNSVNSLDGEFGVDGRSVNGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKNSMGKSNIFSSSMGLGRYFSFTELQEATKNFDSKSIIGVGGFGNVYLEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPSGHFREHLYGKNLPALSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENLTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDEPKTSAAVPTAAVPTSPVPPTPSTPSDDHPAAGPEVNNASAGVQSIDDHSGTAMFAQFSNLNGREVIVEAGSKKLASGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0009 843 Pfam Protein tyrosine and serine/threonine kinase 513 675 IPR001245 GO:0004672|GO:0006468
Ssu2g0009 843 ProSiteProfiles Protein kinase domain profile. 450 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0009 843 PANTHER BNAC03G60370D PROTEIN 15 796 - -
Ssu2g0009 843 Gene3D Transferase(Phosphotransferase) domain 1 555 773 - -
Ssu2g0009 843 SMART serkin_6 496 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0009 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Ssu2g0009 843 SUPERFAMILY Protein kinase-like (PK-like) 479 745 IPR011009 -
Ssu2g0009 843 Pfam Malectin-like domain 32 385 IPR024788 -
Ssu2g0009 843 MobiDBLite consensus disorder prediction 777 791 - -
Ssu2g0009 843 MobiDBLite consensus disorder prediction 758 812 - -
Ssu2g0009 843 PANTHER OS07G0166700 PROTEIN 15 796 IPR045272 GO:0004714|GO:0006468
Ssu2g0009 843 Gene3D Phosphorylase Kinase; domain 1 514 554 - -
Ssu2g0009 843 Gene3D Phosphorylase Kinase; domain 1 470 513 - -
Ssu2g0009 843 Gene3D - 205 388 - -
Ssu2g0009 843 Gene3D - 29 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0009 Ssu-Chr2 777916 780831 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu2g0009 Malectin_like 1.6e-38 CL0202