Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0008 ATGGCCTCTCCTCCTCAAACCTCCGTTATTAAGGGAGCAAAAGTGCTCATGGTTGGTGCTGGCGGAATTGGCTGCGAGCTTCTCAAGACTCTCGCCCTCTCTGGTTTCCCTGACATTCACATAATTGACATGGACACCATTGAAGTCAGTAACCTGAACAGACAATTTTTATTTCGACAATCCCATGTTGGGCAATCCAAGGCTAAAGTTGCTAGGGATgctgttttaaaatttaggccCTACATAAACATTACACCATATCATGCAAATGTCAAAGATCCTGAATTCAATGTGGACTTCTTTAAGCAATTTAATGTCGTTCTAAATGGACTTGACAATCTAGATGCACGCCGACATGTGAATCGCTTGTGCTTGGCAGCTAATGTTCCTTTGGTTGAAAGTGGAACTACTGGGTTCCTTGGACAgGTCACTGTACATGTCAAGGGAAAAACGGAGTGCTATGAGTGTCAGCCTAAACCAGCCCCCAAGACATATCCTGTCTGTACTATCACAAGTACTCCATCGAAGTTTGTTCACTGTATTGTCTGGGCCAAGGACCTactttttgctaagttatttgGGGACAAGAATCAGGACAATGATTTAAATGTTCGATCCAGTGATGCTGCCAGCTCATCAGAAAATGTAGAGGATGTATTTGAATGGAGGAAAGATGAAGACATTGATCAatatggaaagaaaatttttgatcATGTATTTGGGTATAACATCGAATTAGCTTTGTCTAATGAAGAGACATGGAAAAATCGTAATAGACCAAAGCCTATATACAGCAAGGTTGTCCTGTCTGATGAACTGGCTCAACCAAATGGAAATTTGGAGAAGAATTGTGCATCTGATGATGGATTATCAGTTTCTGCGATGGCATCTTTGGGGATGAAGAACCCACAGGATATTTGGAGTCTCAAAGAAAATTCTAGAGTATTTCTTGAAGCATTGAGactatttttcacaaaaaggGAAAATGTGATTGGCAATCTAAGCTTTGATAAAGATGATCAGTTGGCTGTAGAATTTGTTACTGCAGCTGCTAACATACGGGCTGCTTCATTTGGCATCCCTCTGCACAGCCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCAACTACAAATGCTGTTATTGCTGGGTTGATTGTCATTGAAGCAATCAAAGTGCTGCAAAAcgacattaaaaattatagAATGACATATTGCCTGGAACATCCATCAAGAAACATACTGCTTATGCCGGTGGAGCCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCTGAGACACCTTTATCACTTGAAATAAACACCAACCGTTCAAAGTTGAAAGActttgttgaaaaaattgtCAAGGCAAAGCTTGGGATGAACCTTCCTCTTATTATGTGTGCTTCAAACCTCCTTTATGAAGCTGGTGATGTTGAGGAAGACATGGTTGCAATTTATGAGGCCAACCTTGAAAAGGTTCTGGCTGAGCTTCCTTCCCCAGTAACTGGTGGCACAATGCTTACTGTAGAGGATATGCAGCAGGAATTCGTTTGCAATATTAACATCAAGCACAGAGAGGAATTTGATGAAGAGAAAGAACCTGATGGGATGGTTCTCTCAGGATGGACTCAACCAGTGTCAGCACCagaaaataaagacaaatcTGTTGGCAATGGTGCAGGCCCCTCAGATGCATCAATAACAGCTGTAGAATCTGAAAAGGATGATGAGGTAACTATAGTTTCCACCTTGAAGAAACGAAAACTTCCTGATGAATCTGATATTTCAAATGCTGCCGACGAAACGAAGCATCACAAGCAATTGCAAGTAATTGATGACGAAGACGATCTTGTTGTGCTTGATGGGGACTTAGACAGCTTTAAAAAGAGAAGATTGTCATAG 1917 0.3886 MASPPQTSVIKGAKVLMVGAGGIGCELLKTLALSGFPDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPYINITPYHANVKDPEFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAANVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQDNDLNVRSSDAASSSENVEDVFEWRKDEDIDQYGKKIFDHVFGYNIELALSNEETWKNRNRPKPIYSKVVLSDELAQPNGNLEKNCASDDGLSVSAMASLGMKNPQDIWSLKENSRVFLEALRLFFTKRENVIGNLSFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQNDIKNYRMTYCLEHPSRNILLMPVEPFEPNKSCYVCSETPLSLEINTNRSKLKDFVEKIVKAKLGMNLPLIMCASNLLYEAGDVEEDMVAIYEANLEKVLAELPSPVTGGTMLTVEDMQQEFVCNINIKHREEFDEEKEPDGMVLSGWTQPVSAPENKDKSVGNGAGPSDASITAVESEKDDEVTIVSTLKKRKLPDESDISNAADETKHHKQLQVIDDEDDLVVLDGDLDSFKKRRLS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0008 638 Pfam Ubiquitin-activating enzyme, SCCH domain 319 369 IPR019572 -
Ssu2g0008 638 Gene3D - 436 626 - -
Ssu2g0008 638 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 442 533 IPR028077 -
Ssu2g0008 638 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 6 555 - -
Ssu2g0008 638 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 10 484 IPR035985 GO:0008641
Ssu2g0008 638 Pfam ThiF family 9 433 IPR000594 -
Ssu2g0008 638 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 163 374 IPR023318 -
Ssu2g0008 638 CDD Uba2_SUMO 14 435 - -
Ssu2g0008 638 PIRSF SUMO_E1B 2 623 IPR030661 GO:0016925|GO:0019948
Ssu2g0008 638 MobiDBLite consensus disorder prediction 548 612 - -
Ssu2g0008 638 Gene3D - 4 108 IPR042449 -
Ssu2g0008 638 MobiDBLite consensus disorder prediction 574 612 - -
Ssu2g0008 638 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 6 555 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0008 Ssu-Chr2 766309 774255 Transposed