Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0007 ATGTACTCAGCAATCGCCAATCGGTATAATCCCCTTGTGTTAGGACGGGAGAGGAGCAGGATTGAGAGTTCTATTTGGAGGGGGCAACACACTGAAAATGATGTTCCTGCAGCAACCAATCCTGTTGTGATTATTGATTCAGATGAGGAAGATGATAGAGATCAAAAATCTATTGTTCCATTTCATGAAGTTGTGTTGCCAAGACTAGTTGCGCTGTCTCCTGCATTAAAAATGATTgtTAAATGGAGCACAAGAACTTATGCATCTGATTCATGGAATACCAAACAAAAAGCAGATGTATTTGGAATTACTGTTGCTGAAGATGATCTCATGGTAACTGAAATCTCAGTTCATCCTAGACACATGAAACAGATGAAACCCCATCAAGTTGAAGGATTCAATTTTCTTGTTAGAAATCTTGTGGGCGACTATCCTGGAGGCTGCATCTTGGCCCATGCTCCAGGATCTGGGAAAACATTCATGATAATCAGTTTCATGCAAAGTTTTCTAGGCAAGTATCCTAATGCAAGACCCTTAGTGGTGCTTCCTAAGGGAATATTATCAACCTGGAAAAAGGAGTTTCAAACCTGGCAAGTGGAGGACATACCCCTATATGACTTTTACACAGTGAAGGCAGATAGTAGAACTCAACAACTAGAGGTGTTGAAACAATGGATGGAGCATAAGAGCATCCTTTTCTTAGGATACAAACAGTTCTCCTCTATTGTCTGTGATAATGGGACCAACAGTACATCTCTATCTTGCCAAGAGATTTTGCTCAAAGTTCCTTGA 792 0.404 MYSAIANRYNPLVLGRERSRIESSIWRGQHTENDVPAATNPVVIIDSDEEDDRDQKSIVPFHEVVLPRLVALSPALKMIVKWSTRTYASDSWNTKQKADVFGITVAEDDLMVTEISVHPRHMKQMKPHQVEGFNFLVRNLVGDYPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRTQQLEVLKQWMEHKSILFLGYKQFSSIVCDNGTNSTSLSCQEILLKVP 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0007 263 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 80 263 IPR044567 GO:0080188
Ssu2g0007 263 Pfam SNF2-related domain 146 213 IPR000330 GO:0005524|GO:0140658
Ssu2g0007 263 Gene3D - 92 255 IPR038718 -
Ssu2g0007 263 PANTHER PROTEIN CHROMATIN REMODELING 35 80 263 - -
Ssu2g0007 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 242 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu2g0007 Ssu-Chr2 713382 717341 Dispersed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ssu2g0007 SNF2_N 1.9e-08 CL0023