Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0006 ATGGTACAGTCCCTTGCTAAGGTTCAAACACCTAGAAAAGTGGTACTGTCAGGGACCCTTTATCAGAATCATGTGAGGGAGgtgtttaacattttaaatcttGTTCGGCCAAAGTTTTTGAAGATGGAAACATCTAGGCCTATTGTCAGGCGCATTCATAGTAGAGTGCATATTCGGGGTGTGAGAGGCTTCTATGATTTAGTTGAAAACACTTTGCAGAAGGACATggattttaaaaggaaagtggCCGTCATACAAGATTTGTGTGAGATGACGAGCAAGGTACTGCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCTGGTCTTGTTGATTTTACTGTGGTACTCACTCTTAGCCCTAGACAGAAGCCTGAagttgagaaattagaaaagctATCTAGAAAGTTCAAGATAAGTTCTGTAGGCAGTGCTGTCTATCTGCATCCTAAACTGAAACCTCTTGCAGAAAAATGTGGTGAAAATTCTATATCTGATAATGCAATGGATGACTTGATAGAGAAATTAGATGTGAGAGATGATAGGCTGACTATGAAATGGAAAGGCTGCAGCCTcggaaaagaaatttttgtaatCTCAGGAGAATCAAGCTCTGAGCACCGAGAATGGTCAATGGAAAGATTTAACAATTCTCCTGATGCCAAAGTCTTCTTTGGTTCAATCAAGGCATGTGGAGAGGGCATATCACTGGTTGGGGCATCCCGCATAATAATTTTGGACGTTCATCTCAATCCTTCGGTTACTCGTCAAGCTATTGGTCGTGCATTCAGACCGGGCCAGAAGAAGAAAGTCATCGTGTATCGATTGGTATCTGCTGATTCTCCAGAAGAGGAAGATCATATTGAGGCGGTTGAGGTGAAAGAGTGTGGTGATCTCTTTCTTGAAAGTCCACTGTTAGGGGAGAATGTAAAAGCATTGTATGAAAGAATTAGGGGTTTCATAAAACCCTGGATTACATTACCTAGAGCGTCAAAACAGTGGAGAATTGGTACGCGACAGTGGCGACGCGGTGCAAATCCTAACACGTCGTTGGAACAGAGAAAGGCAGCGCAACTCTGCACTCCTCTCCCTGCTCGGCGCTCTCATCGCTGCTCCTCCGTGCACGGTTGCTCGCCGTTGAGCCGTCGGCTTCTGCTCCCTGCCTTCCTAATCGGTCTGACATCTGAAGACCGAAGAGGTTTGATTCCAATTTTCCAAATCCCTGATCCCTGCTAG 1236 0.4223 MVQSLAKVQTPRKVVLSGTLYQNHVREVFNILNLVRPKFLKMETSRPIVRRIHSRVHIRGVRGFYDLVENTLQKDMDFKRKVAVIQDLCEMTSKVLHYYKGDFLDELPGLVDFTVVLTLSPRQKPEVEKLEKLSRKFKISSVGSAVYLHPKLKPLAEKCGENSISDNAMDDLIEKLDVRDDRLTMKWKGCSLGKEIFVISGESSSEHREWSMERFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVIVYRLVSADSPEEEDHIEAVEVKECGDLFLESPLLGENVKALYERIRGFIKPWITLPRASKQWRIGTRQWRRGANPNTSLEQRKAAQLCTPLPARRSHRCSSVHGCSPLSRRLLLPAFLIGLTSEDRRGLIPIFQIPDPC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0006 411 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 181 IPR044567 GO:0080188
Ssu2g0006 411 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 182 316 IPR044567 GO:0080188
Ssu2g0006 411 Pfam Helicase conserved C-terminal domain 193 265 IPR001650 -
Ssu2g0006 411 Gene3D - 1 58 IPR038718 -
Ssu2g0006 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 285 IPR027417 -
Ssu2g0006 411 SMART helicmild6 181 266 IPR001650 -
Ssu2g0006 411 Gene3D - 162 303 IPR027417 -
Ssu2g0006 411 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 151 318 IPR001650 -
Ssu2g0006 411 CDD SF2_C_SNF 193 277 - -
Ssu2g0006 411 PANTHER PROTEIN CHROMATIN REMODELING 35 1 181 - -
Ssu2g0006 411 PANTHER PROTEIN CHROMATIN REMODELING 35 182 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0006 Ssu-Chr2 706827 713333 Transposed