Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3975 atgCGGATTTTCAATTTTGTCTATGTTAAAATTACAGCTGTAAAGAAACGGGGTCGCGAATCCGTCTTAGGTGATTCAGAAAAGGCGAACCATAGGATGAGTGGAATGGAATCTCCCCAAAAAGAGGGCATAAAGAAATCCAAAGAACAAAGAAGCCCTGGCTGGTCCACGAGGCAAGTTCTACCCGAGCCCATCACGAAAGATGAGCAAGAGGTTGTGGAGACTCTGTATGCTTTGGCTGGAATGTTCCCTGATAATGGCTCCAATGTTAAGAGTGAACTACACAGTGAATCTTTACCACAAAACTCCACGGTTTTGCAGGACCAAGAGGAGAGTCAGAGTGCTAATGCTACTATTGAAGCCTCGGCAACTACTCAGGATGCTGGAGAAAGATCACCTAAGGGGTGTAAAAAAATCAGTTCGTTGAATGAAGCCATTGGTCAAGAACAGACTGGTTTTCCTGAGGGTGCTAAGTTCTTGGTGGCTACTCTCAGCACtgctccaaaaataaataagcagACCGTGCCTATGATGGTTAGGAGTGAAAATGGCGACAAAGTTGCATTGCGTGATTCTGAATTATCTCTGGAAATGGGATTAAATGTGCCCACACAACCACGTATTTCGCATATTGGGAGGAAATCAGACATGGAATTTCAGACATATAAGCAAGAACAACATACAATCAAATACCAAAAAGAAACTGAAGGTCCAGCATTGTGGCCAGGCTTGTGTCCTACTACATCTGCTGGGATTAGTGCTTCTTATTTGaaGTCTTCTGCTGCTAAAACTCCAGATTGGCTGAATGCTGCTAGTGGTGCCTCGAAACAGGATTTGATGGAAAGTTGTTGTTCTGGTGGAAAGATTTCCGAAATTGTTGTTCATAAAAAGTCGTGGAAGAGGTGTGCAGCTCATGTTCACATCAGTCATCTCATCCGTAATTTAGAAGTGTCAAAAAGACAGCATGGCCATTATCATGATATATCTCAGGCTCCTCTAACTCCTGGGGTGTATGGTCCTCAAAAGCAAAGTTTCAACTTCTTGTCCTTGTCAACCGGAGGTAGTGAGTTAAAGGTCAACGAAAGTTTTAAGAAAGGTGAAAGTAAGTTGGAACCATTGCCAAAATCGCAAGTGCCTTATTTTCGGTCACTACAGCAGCAGCACGGCCTCATGCCCATTCAAAGTCCGTATGCCTCCACTTTCCTTGATCGGCTTCCTGTTGCAGGACCACAGGTTCGGTTGCAGCAACAGCACCCTCATTATTATGGTACCCCCGTTACGTGGAACTCATTATAG 1296 0.4344 MRIFNFVYVKITAVKKRGRESVLGDSEKANHRMSGMESPQKEGIKKSKEQRSPGWSTRQVLPEPITKDEQEVVETLYALAGMFPDNGSNVKSELHSESLPQNSTVLQDQEESQSANATIEASATTQDAGERSPKGCKKISSLNEAIGQEQTGFPEGAKFLVATLSTAPKINKQTVPMMVRSENGDKVALRDSELSLEMGLNVPTQPRISHIGRKSDMEFQTYKQEQHTIKYQKETEGPALWPGLCPTTSAGISASYLKSSAAKTPDWLNAASGASKQDLMESCCSGGKISEIVVHKKSWKRCAAHVHISHLIRNLEVSKRQHGHYHDISQAPLTPGVYGPQKQSFNFLSLSTGGSELKVNESFKKGESKLEPLPKSQVPYFRSLQQQHGLMPIQSPYASTFLDRLPVAGPQVRLQQQHPHYYGTPVTWNSL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3975 431 MobiDBLite consensus disorder prediction 19 66 - -
Ssu1g3975 431 MobiDBLite consensus disorder prediction 88 135 - -
Ssu1g3975 431 MobiDBLite consensus disorder prediction 19 52 - -
Ssu1g3975 431 PANTHER - 12 321 - -
Ssu1g3975 431 PANTHER - 321 427 - -
Ssu1g3975 431 PANTHER OS02G0121500 PROTEIN 12 321 IPR040305 -
Ssu1g3975 431 PANTHER OS02G0121500 PROTEIN 321 427 IPR040305 -
Ssu1g3975 431 MobiDBLite consensus disorder prediction 89 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3975 Ssu-Chr1 98320578 98323081 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0065 5 1267684 1269789 Ssu1g3975 1 98320578 98323081 PCT