Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3971 ATGATAGGATCTTTTATTACCAGGGCACTTGTAATGGTTTTTGGCTATGCCTACCCAGCGTATGAATGCTATAAAGCAGTTGAAAAGAATAAGCCAGAAATTGAACAACTTCGCTTTTGGTGCCAGTACTGGATTTTGGTAGCTGTTTTGACAGTATGCGAGCGGATTGGTGATACTTTTATATCATGGGTCCCAATGTATAGTGAAGCTAAGTTggcattttttatatacttgtgGTACCCGAAAACAGAGGGAACAACGTATGTGTATGATGCCTTCTTTAGACCATATGTTGCGAAACATGAGACAGAAATTGATCGCAATTTGTTGGAACTAAGGACAAGGGCCGGAGATACTGCAGTTTTGTATTGGCAAAAAGCTGCTACCTATGGCCAGACTAGAATATTTGACATTTTGCAGTATGTTGCTGCACAATCAACACCTTCGCCTCGCCTTGCTCAGCAACGACCAGCTGTGAGGGTGCGTCAACCAGCATCTAGTAATAGCCAACCAGCGTCTGCAACAGAACCACAAGCTGAGGATCCATCTTCTCCTACTTCTAGCTCATCCAGTCAGCACCAGAAGGAAGTGGCAGAGGAGTTGGGTTCTTCACAAGTGCCTAAAGCAGCCTCCACTGTAGCAGGTTTAAGCAGCCAGAAGTCTAATCCTATACCTGAAATGACCAATCAATCCGTACCTGCAGAGGCAGAGCCAATGCAGATTGAAGCAGCACCACCTCCATCCTCTTCTGCAAATGAAAATGAGAACCCTCCCTTGGAAGATACAATAATGGAAGAAAACGTTAGGGTTACACGAGGTAGACTAAGAAAAAATGGATCAGCTGGAATCCGTTAG 855 0.4351 MIGSFITRALVMVFGYAYPAYECYKAVEKNKPEIEQLRFWCQYWILVAVLTVCERIGDTFISWVPMYSEAKLAFFIYLWYPKTEGTTYVYDAFFRPYVAKHETEIDRNLLELRTRAGDTAVLYWQKAATYGQTRIFDILQYVAAQSTPSPRLAQQRPAVRVRQPASSNSQPASATEPQAEDPSSPTSSSSSQHQKEVAEELGSSQVPKAASTVAGLSSQKSNPIPEMTNQSVPAEAEPMQIEAAPPPSSSANENENPPLEDTIMEENVRVTRGRLRKNGSAGIR 284
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3971 284 MobiDBLite consensus disorder prediction 150 284 - -
Ssu1g3971 284 MobiDBLite consensus disorder prediction 160 235 - -
Ssu1g3971 284 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
Ssu1g3971 284 PANTHER HVA22-LIKE PROTEINS 6 223 IPR004345 -
Ssu1g3971 284 PANTHER HVA22-LIKE PROTEINS 216 278 IPR004345 -
Ssu1g3971 284 PANTHER HVA22-LIKE PROTEIN 216 278 - -
Ssu1g3971 284 PANTHER HVA22-LIKE PROTEIN 6 223 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g3971 Ssu-Chr1 98266340 98268296 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0070 5 1351636 1353216 Ssu1g3971 1 98266340 98268296 PCT