Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3933 ATGGCTGATTCAGGCTCAGCCTCTTCTAGGAGAATGTGGTGCTCCATCCCCGAACGGGTTCAGCTGCATGCGGCCATGCTGGCCCTGCAGTTTGGCTATGCCGGGTTCCATGTGGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTCGTTTTCCCAGTCTACCGCAACATTATTGCTTTTCTCCTGCTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCTGCCATTACTTTAAACTTCCTCTTACAGTTCTTTCTTCTGGCGCTTGTCGGGATTACTGCCAACCAAGGTTTCTACTTGCTTGGCTTGGACAACACGTCCCCAACCTTTGCATCAGCAATACAGAACTCTGTCCCGGCCATTACATTTCTCATGGCAGCCATACTCAGgaTAGAGCAAGTGCGGCTGAACCGAAAGGATGGGATAGCGAAGGTGGCGGGAACCATATTCTGTGTTGCTGGGGCAACGGTGATTACACTATACAAGGGTCCAACAATATATAGCCCAACTCCACCTCTAAACAGCCCAGTATTTGACTTTGGCTCACTCTCACTGGGAGATGCGAAGGGCAAGAACTGGACCCTTGGGTGCCTCTACCTCATAGGGCATTGCTTGTCCTGGTCTGGTTGGCTTGTGTTGCAAGCACCAGGTCCTCAAGAAGTACCCAGCTCGCCTCTCTGTCACTTCCTATACATGCTTCTTTGGACTCATCCAATTCCTTGTGATTGCTCTTATCGTTGA 753 0.502 MADSGSASSRRMWCSIPERVQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGIAKVAGTIFCVAGATVITLYKGPTIYSPTPPLNSPVFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPGPQEVPSSPLCHFLYMLLWTHPIPCDCSYR 250
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3933 250 PANTHER WAT1-RELATED PROTEIN 14 226 IPR030184 GO:0016021|GO:0022857
Ssu1g3933 250 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
Ssu1g3933 250 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Ssu1g3933 250 PANTHER WAT1-RELATED PROTEIN 14 226 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g3933 Ssu-Chr1 97408959 97410241 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0096 5 2137449 2141185 Ssu1g3933 1 97408959 97410241 PCT