Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3923 ATGGCATTCCCACAGCTCATCCCTTCGCCTTCTTCTTCGTCCCTACCTCACAAACCCTCCTTAAACCCTATCAGACTCTCCCTAAACCCTAAATGCCCAACCTCCACACCGCAGCATCTCAATCTCAACATTCTCCGGCACCGGCGCCGGAAGCCTAATTCCACGCTGCGTTGCTCCGCCTCCTCGTTCTCGGAGAAGCACCACACGAACTCCCCGAACTCCGACGACGTGGTGGAGCTCCCTCTGTTCCCGCTCCCGCTGGTCCTCTTCCCGGGCGCCATCCTCCCTCTGCAGATCTTCGAGTTCCGGTACCGCATCATGATGCACACGCTCCTCCACACGGACCTCCGCTTCGGCGTCATCTACACCGACGCCGTGTCGGGCACCGCCGACGTCGGCTGCGTGGGCGAGGTCATAAAACACGAGCGCCTCTTGGACGACCGCTTCTTCCTAATCTGCAAGGGGCAGGAGCGGTTCCGCGTGACGGGCGTGGTCCGCACGAAGCCCTACCTGGTCGCGCAGGTGACGTGGCTCGAGGACCGGCCTTCTCCCTCCACGGACCTCGATCTGGAGGGGCTCGCCGCCGAGGTGGAGACCTACATGAAGGACGTGATCCGGTTGTCGAACCGGTTGGGCGGGAAACCGGAGAAGGAAGTTGGGGATTTGAGGAGAAACTTGTTCCCCACGCCGTTTTCGTTTTTCGTTGGGAGCACCTTCGAGGGCGCCCCGAGGGAGCAACAGGCGCTGCTTGAATTGGAGGACACCGCTGCCAGATTGAAGAGGGAGAAGGAGACGTTGAAGAACACGCTTAATTACCTCACTGCTGCCTCTGCTGTCAAAGACGTCTTCCCGTCTTCTTCCAGCTCTTCTTCTCCTTGA 879 0.6007 MAFPQLIPSPSSSSLPHKPSLNPIRLSLNPKCPTSTPQHLNLNILRHRRRKPNSTLRCSASSFSEKHHTNSPNSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVSGTADVGCVGEVIKHERLLDDRFFLICKGQERFRVTGVVRTKPYLVAQVTWLEDRPSPSTDLDLEGLAAEVETYMKDVIRLSNRLGGKPEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLKREKETLKNTLNYLTAASAVKDVFPSSSSSSSP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3923 292 ProSiteProfiles Lon N-terminal domain profile. 80 268 IPR003111 -
Ssu1g3923 292 Gene3D - 77 180 IPR046336 -
Ssu1g3923 292 SMART lon_5 79 268 IPR003111 -
Ssu1g3923 292 MobiDBLite consensus disorder prediction 1 20 - -
Ssu1g3923 292 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 10 286 - -
Ssu1g3923 292 Pfam ATP-dependent protease La (LON) substrate-binding domain 79 267 IPR003111 -
Ssu1g3923 292 SUPERFAMILY PUA domain-like 79 267 IPR015947 -
Ssu1g3923 292 Coils Coil 242 276 - -
Ssu1g3923 292 MobiDBLite consensus disorder prediction 51 73 - -
Ssu1g3923 292 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 10 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3923 Ssu-Chr1 97277001 97277879 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0100 5 2216844 2217644 Ssu1g3923 1 97277001 97277879 PCT