Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3811 ATGGATGCTCCAAGCAATCCCGATATCTCTGTGGAGGTTCCACCTTACCTTCGAGTCCACAAAAACGGAACCCTTGAGAGAATAGCCGGCACCCAAGTTGTTCCTGCGGGCTTCGATTCCGACACCAACGTTGTCTCCAAAGACATGCTCATCATCCCCGAAACCGGTGTCACAGCCAGGCTCTACCGTCCCAATTCCACCCCCCAAAACGCGAAGCATCCTTTGGTCGTCTACTTCCACGGTGGGGCCTTTTGCATCTCTTCGGCCTCCGACCCTCTTTACCATAACTCCCTCAACAAACTCGTGGCCGAGGCTAACCTTGTCGCTCTCTCCGTCAATTATAGGCTCGCACCAGAGCACCCTCTTCCAACCGCGTACCAAGACTCTTGGGCCGCGATTCAATGGGTGTTTTCTCATGCTAAAGACCACGAAGAAGACTGGCTCAGGGACAACGTTGACTTTGGCAGGGTATTCCTGGCAGGGGACAGCGCAGGTGCCAACATAGGACACTACATGGCCTTGAAGTTAAAGGATTTCGATTTCAAGGTCCCGGGTCTTATCATGGTGAACCCTTATTTCTGGGGAAAGGAAGCAATTGGAGTAGAGATTACTGATCCGGAGAGGAAGAAGATGGTGGATAAGTGGTGGGATTTTGTTTGTCCTTCGGACAAAGGGAATGATGACCCTCTGATTAACCCCTTTGTGGAGGAGGCTCCGGGTCTTGAAGGGGTGGCTTGCAACAAGGTGCTTGTTATTGTTGCGGAGAATGACATACTGAGGGAAAGGGGGAAGCTGTATCACAAAAAGTTGGCCAACAGTGGCTGGAAAGGAACCGCTGAGTTCTACGAGACTCTTGGGGAGGATCACGTGTTTCACATATTCAACCCCAATTGCGACAAGGCCAAGAGTTTGGTTAAACGCGTCGCTGATTTTATCAATGCACAGTGA 948 0.5116 MDAPSNPDISVEVPPYLRVHKNGTLERIAGTQVVPAGFDSDTNVVSKDMLIIPETGVTARLYRPNSTPQNAKHPLVVYFHGGAFCISSASDPLYHNSLNKLVAEANLVALSVNYRLAPEHPLPTAYQDSWAAIQWVFSHAKDHEEDWLRDNVDFGRVFLAGDSAGANIGHYMALKLKDFDFKVPGLIMVNPYFWGKEAIGVEITDPERKKMVDKWWDFVCPSDKGNDDPLINPFVEEAPGLEGVACNKVLVIVAENDILRERGKLYHKKLANSGWKGTAEFYETLGEDHVFHIFNPNCDKAKSLVKRVADFINAQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3811 315 Pfam alpha/beta hydrolase fold 76 292 IPR013094 GO:0016787
Ssu1g3811 315 PANTHER ARYLACETAMIDE DEACETYLASE 5 313 - -
Ssu1g3811 315 Gene3D alpha/beta hydrolase 17 315 IPR029058 -
Ssu1g3811 315 PANTHER PUTATIVE-RELATED 5 313 - -
Ssu1g3811 315 SUPERFAMILY alpha/beta-Hydrolases 12 313 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3811 Ssu-Chr1 95169850 95170797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3811 6 314 Carbohydrate Esterase AT3G48700 42.638 2.57e-86 260
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0228 5 4779408 4780548 Ssu1g3811 1 95169850 95170797 PCT