Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3809 ATGGCGAGAGGGAAGTGGGTTTGTTCATACAAGAAAACCACTCTCTTAGTTTGCTTTTTCAACATTGCCGTTGCTCTCTACGTTCTTCGCTCTCTTTATGCTTCTCTTTATATCTACTCCGGCAACGTTTCCCGTAACGTTGCGTTGTATAACCCAGATCAGATTCGGAAAATGGAAGAATCAATCGAAATCCGCAGGGAATTTAAACCCCTGAAGTTAATTAAGTGGGTGAAGGCTTTAGAAGGGGAGTTTTCGAGTGAAACTGTGGCGGTTGAGTTGCCTCTGCATTTGAAACAGAACATAGTTGATGAGATCTTGCAGAGACTAAGGAGCTTGAATTCCAATAGCACAGATATTGCTAAGGAACGAGAAGTAGTTGAGAGTTGGCGCAAGGAAAAACTGGAAGAGGTCAAGTTGGCTCTTGTGAAGGGGACTTCCAACTCAACCATCCCCCGTGAAGAAGCCAGTTTGCTAGTAAGAGCTTTGGAGTCTCATTGGGCTGTGCTTTGCGAAGAGATTGGCCTCTGGATACCTGCTCAAGTTGCTAATGAAGAACATGATGACAAACCTGAGGGTGCAGAGGACTTTGAGGAGGAGGTTCTTCCTGGCAGGCCCCTCTCACCTGAGTGCCATGCTGAACTTCACACAGATTATGATGGTGCTGCAGTAAGATGGGGTCTTACCCACCACAAAGATAGTGCAGCTGATTGCTGTCAGGCTTGCTTGGACCATGCGGAACATGCCAAAGAAGGGGAAAAGAAATGCAATATTTGGGTTTATTGCCCATCTGAGTTCGGGTGTCATTCTCCAGATATATACCAGCACAAACATCAGGAATGTTGGCTGAAATATGTAAGTTCTACCCGACAATTCACTGGTTTGCCTCTTCTCTGTTGCATAATAGCTTTTGATACTTTTATTCTCTCTGATCTGAGACAAcacttaagttttatatattgtctggtttga 969 0.4355 MARGKWVCSYKKTTLLVCFFNIAVALYVLRSLYASLYIYSGNVSRNVALYNPDQIRKMEESIEIRREFKPLKLIKWVKALEGEFSSETVAVELPLHLKQNIVDEILQRLRSLNSNSTDIAKEREVVESWRKEKLEEVKLALVKGTSNSTIPREEASLLVRALESHWAVLCEEIGLWIPAQVANEEHDDKPEGAEDFEEEVLPGRPLSPECHAELHTDYDGAAVRWGLTHHKDSAADCCQACLDHAEHAKEGEKKCNIWVYCPSEFGCHSPDIYQHKHQECWLKYVSSTRQFTGLPLLCCIIAFDTFILSDLRQHLSFIYCLV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3809 322 Pfam PAN domain 216 283 IPR003609 -
Ssu1g3809 322 PANTHER PLANT/F17M5-140 PROTEIN 1 287 - -
Ssu1g3809 322 Gene3D Hepatocyte Growth Factor 215 298 - -
Ssu1g3809 322 PANTHER OS02G0761600 PROTEIN 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3809 Ssu-Chr1 95148863 95152265 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0232 5 4795189 4803526 Ssu1g3809 1 95148863 95152265 PCT