Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3765 atgagCCATTGGATACACGTGGCGGTGGCAGCATCCGCCGTGGGATGCGTTTCAACCCTTTTGTTGGTCTTTCTCTGGCGTTGGTGCCACAAAAAAAGCCGTAGAAATTTCGTTGAACCGGCTAGCTTGACCAGAGTGGAGAGTGTTCAAGGAGGGATTTCTGTTTCTGGGCTTCATCAGCAACCTTTTCAATTGGATCAGGGGAGCAAGAACAGCAAGGGCAATTACAACAATTACTACGTTTTTCGTGGTGGGGTGTCGGGGAAAAGAAGCTTGTTCAATTGGGGTGATCATCCATCTATGGCCGCCGATGCTGTTGAAAACGGATGGTCACGATTTGCTTTCACGGGGTACAAGAGTTACACGCCGTCTCCTTCAAAAAGATCAGCACTTTTAGGGGTGTGTGCTGCGCCGGGAAGTGATTTCGGGAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGTCACGTGGATCTGCTGAGTTTATGCAGAAGGTGAGGTTGAATCCCGGGATTAAAAAGTCTCATcaacataacaacaataataacaatagtgcTTCTTTAAATGTTTCTTCTATCATTAGAGCGGCTTTGCCTTTGCCTGGGCCTCCTTTGGGGAACTGCGCGTTCCCACAAGAGGCATATTTTGAGATTACTATTTTATATTCGCGTGGGGATGAATATGAATCGGTTGGGAAGAGTGGGGAGGGTGAGAAGACCAAGCTTTTGGTTCAAGGCAACTCGAATGGAAAAGGGAATTCGGAGGCTTTGGCTCGTGTTACCAGCGGGAAtggtaataataaaatcaacaatGTTGAAGGAGAGGGTGGGAAGGGTGAATCGGTGATGTTCTCGTTGGGATTAACAGCAGGGGGTTCTGTTCCTTTGAGAGTTCCCGGTAGCTACCCTGGGGGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAATGAAACTTGTACGTGAATCGGAGAGGGCAGAATGGGTAGGAACCGATAGAGTGATCGGTTGTGGGTTTGATCCTAGGCAGAAGAAGGTTTTCTTCACATTAGACTCGGAGCTAATGCATGTCATTCACTGCCAGACAGAGGAATTTGGCACACCACTCTTTCCAATTTTGGCTGCAAATATAGACATTCTGGTGTTAGTTAATTTTGGACAAAGTGCATTTAAATATGCACCTGCAAATGCTCAGAGAACACCAAATCCATGTTTCATAGCCCCACTTGTAAATTCCCCTGCTGCTACCCTGGGCTATGATGATAGCAAGGAGCTATTCTCAATGGGAAGGATTGACTCTCAGTGGCTCAATCGGTCCACAACCAAAGGAAGCcacaataataatcatcataataataatcgAACTTTGGATTTTGATGAGGAGTCTGAGGCTGATCTATTTGAAATCGTCTTAGATGGTTCTGGAAAATCTCCAAACACAGCATCGTAA 1452 0.4442 MSHWIHVAVAASAVGCVSTLLLVFLWRWCHKKSRRNFVEPASLTRVESVQGGISVSGLHQQPFQLDQGSKNSKGNYNNYYVFRGGVSGKRSLFNWGDHPSMAADAVENGWSRFAFTGYKSYTPSPSKRSALLGVCAAPGSDFGRESEAEISWEVSRGSAEFMQKVRLNPGIKKSHQHNNNNNNSASLNVSSIIRAALPLPGPPLGNCAFPQEAYFEITILYSRGDEYESVGKSGEGEKTKLLVQGNSNGKGNSEALARVTSGNGNNKINNVEGEGGKGESVMFSLGLTAGGSVPLRVPGSYPGGIGFNSNGSLYLDGMKLVRESERAEWVGTDRVIGCGFDPRQKKVFFTLDSELMHVIHCQTEEFGTPLFPILAANIDILVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNNHHNNNRTLDFDEESEADLFEIVLDGSGKSPNTAS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3765 483 Gene3D - 153 401 IPR043136 -
Ssu1g3765 483 PANTHER RAN BINDING PROTEIN 9-RELATED 3 479 - -
Ssu1g3765 483 SUPERFAMILY Concanavalin A-like lectins/glucanases 296 393 IPR013320 -
Ssu1g3765 483 MobiDBLite consensus disorder prediction 243 270 - -
Ssu1g3765 483 MobiDBLite consensus disorder prediction 243 273 - -
Ssu1g3765 483 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 3 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3765 Ssu-Chr1 94498671 94500675 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0276 5 5787805 5789971 Ssu1g3765 1 94498671 94500675 PCT