Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3763 ATGGAAGCAGGGGAAGATTGCTGCGTTAAGGTTGCAGTCCATGTACGGCCACTCATTACCGACGAGAAGCTTCAAGGATGCAAAGACTGCGTCACCGTCGTCCCTGGGAAGCCGCAGGTACAAATTGGTGCCCATTCCTTTACATTTGATCATGTTTACGGAAGCACTGGTTCTCCCTCAAGTGCCATGTTTGAACAATGTGTTGCTCCCCTTATTGATGGTTTGTTTCAAGGATATAATGCTACTGTTCTCGCATACGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGCCAAACTGGAATAATACCTCAAGTTATGAATGTTTTGTTTAGCAAAATTGGGACCGTAAAGCACCAGATTGATTTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATTCCTCCTCCTTGAGCAAACCAGAAACTGCAAACGGACACGCAGGAAAAATGACCTCTCCCGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGTGTCATTACCCTTGCAGGATCTACTGAAGTCAGTGTAGCAACACTAAAAGAAATGGCTACTTGCCTGGAACAGGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGATCTCACGCCATCTTCACCATCACATTGGAGCAAATGCGAAAGCTCAATATTCCTAGTGACGGCTGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCCAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGGGTTCACATTAACAAAGGCCTTCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGAGTTCATGTTCCATATAGGGATAGTAAACTTACTAGGCTTTTGCagGATTCACTAGGAGGTAACAGCAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTAGAGTATTTGCAAGCAGAACTTTGTGCTCGTGCTGGCGGCTCTTCTGAGGAAGTTCAGGCTACCAGTAGTATTAAATGGTCCTTAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGTCGTGAACTTCATGAATACCAGTAGTAGATGCTCTATTGTAGAACAAAGCGAAAGGGAAGCTTATGATGGTAGCACATACATTGTGAAGGCTGATGCAGTTAAGAGGAGCTTACCTATCATAGAAGCTGAGTATCCAATGAGTGAAACAGTGGCAGGTGATTCTAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAACAAACGCTTACAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAGAAAGATAATGGAATTGGAGGATGAGAAGAGAACAGTGCAGCAAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACCAACACAGAAATTAGAGGATGTCCATACCCAAAAATTGAAAGCACTTGAAGCACAGATTCTGGATCTGAAGAAGAAGCAAGAGAGTCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGAGGAAATACAGTGTATAAAGGCCCAAAAGGTTCAATTGCAGCAAAGGATAAAACAAGAAGCAGAACAGTTTCGGCAGTGGAAGGCTTCAAGAGAGAAAGAGCTGTTGCAACAGTTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGGCACAAGCTGCAAGCTTTAAATCAGCGGCAGAAAATGGCAAGTATTTCTAAAAAAACTGAAGAAGCAGCAATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCACGTAGAACTTCCAGCCGAGAGACTTTaggtAGCAATGAGAAGTCTTTACAAAGGTGGCTTGATCATGAACTAGAAGTCATGGTAAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCACTTGCAGAGGAATTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCTAAGGGTCTCAGTCCTCCAAGAAAGAATGGATTTGCCagGGCATCCTCCATATCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGAGCCTTCTCTAATCGTGGACGCTGGAATCAATTGCGCTCAATGGGAGAAGCCAAGAATTTGCttcaatatatgtttaattctGTTGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATTGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTCGGTCTCTTACGGCAAAGTGAGATGAAGAGAAAGGAAGCTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTGGAACCACATTGGCTACACCACCTCCTGGAGACTCCCCAAATTCATTGAAACAATATGCTGAAGACATGAAGGGGCCCTTATCTCCAGCGTCTATGCCAGTACCAAAACAGCTAAAGTACACGCCAGGGGTTGCTAATGGCTTGGTGAGGGAATCAGCAGCGTTTGTAGATCAGGGTAGAAGGATGATACCCATTGGACAGCTGTCGATGAAAAAATTAGCGATTGTAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTACTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATGGATTCGACACAGTGATGAGACTATCATGAGAACAAAACCACGTGCACAGGCTTTGGCACGTATCAGGTGA 3084 0.4316 MEAGEDCCVKVAVHVRPLITDEKLQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGSTGSPSSAMFEQCVAPLIDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIGTVKHQIDFQLHVSFIEILKEEVRDLLDSSSLSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVATLKEMATCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNIPSDGCLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQATSSIKWSLRKGLLGLKLLMKIFVVNFMNTSSRCSIVEQSEREAYDGSTYIVKADAVKRSLPIIEAEYPMSETVAGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKIMELEDEKRTVQQERDCLLAEVENLAANSDGPTQKLEDVHTQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQEEIQCIKAQKVQLQQRIKQEAEQFRQWKASREKELLQQLKKEGRRNEYERHKLQALNQRQKMASISKKTEEAAMATKRLKELLEARRTSSRETLGSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRKNGFARASSISPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDIEIREMKDQIKELVGLLRQSEMKRKEAEKELKVREQAVGTTLATPPPGDSPNSLKQYAEDMKGPLSPASMPVPKQLKYTPGVANGLVRESAAFVDQGRRMIPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRTKPRAQALARIR 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3763 1027 Coils Coil 860 894 - -
Ssu1g3763 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Ssu1g3763 1027 Gene3D Kinesin motor domain 2 391 IPR036961 -
Ssu1g3763 1027 Coils Coil 681 701 - -
Ssu1g3763 1027 MobiDBLite consensus disorder prediction 151 179 - -
Ssu1g3763 1027 Coils Coil 531 565 - -
Ssu1g3763 1027 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu1g3763 1027 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu1g3763 1027 Pfam Kinesin motor domain 18 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu1g3763 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1026 - -
Ssu1g3763 1027 CDD KISc_KIF4 7 364 - -
Ssu1g3763 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1026 - -
Ssu1g3763 1027 Coils Coil 574 646 - -
Ssu1g3763 1027 Coils Coil 498 518 - -
Ssu1g3763 1027 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu1g3763 1027 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu1g3763 1027 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu1g3763 1027 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu1g3763 1027 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3763 Ssu-Chr1 94443206 94454492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3763 9 387 Calmodulin-binding Proteins AT5G65930 33.159 4.93e-52 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0278 5 5828784 5841023 Ssu1g3763 1 94443206 94454492 PCT