Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3752 atggggGGTTGGGCTATAGCGGTGCATGGTGGCGCTGGTGTGGACCCTAATCTCCCACCACAGCGTCAGGAAGAGGCGAAACAACTCCTCACTCGCTGTCTCAATCTTGGCATCTCTGCCCTTCGTTCCAAAGCTTCTGCCCTCGACGTCGTCGAACTTGTCGTACGGGAACTGGAAACGGATCCCCTGTTCAACTCTGGGCGTGGATCTGCTCTGACAGAAAAAGGAACAGTGGAAATGGAGGCAAGCATCATGGATGGTTCCAAGAGACGATGCGGCGCCGTTTCGGGCCTCACCACCGTCAAAAACCCCATCTCACTCGCTCGCCTTGTCATGGACAAGTCACCTCATTCCTACCTCGCCTTTAACGGCGCTGAAGAATTCGCCAGACAACAGGGTGTGGAGGTCGTGGAGAACGAATACTTCATCACTCCTGATAATGTTGGCATGCTGAAACTGGCGAAGGAAGCAAATACAATCCTGTTTGATTACAGGATTCCAAATGGTGGGTACGATAGTTGCGGTGCGGGGGTTGAGAGTCCACTGCAGATGAATGGACTGCCAATCAGCGTGTACGCGCCCGAGACGGTTGGGTGCGTGGTGGTTGACAGGGAGGGGAGGTGTGCGGCTGCCACGTCGACAGGTGGGCTCATGAACAAGAAGAGCGGCAGGATCGGTGACTCACCCCTCATAGGCGCGGGGACGTACGCGTGTGAGGTGTGTGGGGTTTCGTGCACGGGGGAGGGTGAGGCTATCATACGGGGCACGCTGGCGCGTGaggtggcagcggtgatggaaTACAAGGGCCTGGGGCTTCAGCAGGCTGTGGACTTTGTCATCAAGCACCGCCTCGATGAAGGGAAGGCAGGGCTCATTGCTGTGTCCAATTCTGGTGACGTGGCGTATGGGTTCAACTGTAATGGCATGTTCAGGGGTTGCGCCACCGAGGATGGCTTCATGGAGGTCGGAATCTGGgaataa 981 0.5484 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLTRCLNLGISALRSKASALDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGSKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFNGAEEFARQQGVEVVENEYFITPDNVGMLKLAKEANTILFDYRIPNGGYDSCGAGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKKSGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQQAVDFVIKHRLDEGKAGLIAVSNSGDVAYGFNCNGMFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3752 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Ssu1g3752 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Ssu1g3752 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Ssu1g3752 326 CDD Asparaginase_2 5 318 - -
Ssu1g3752 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Ssu1g3752 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3752 Ssu-Chr1 94138265 94140472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3752 6 286 Miscellaneous Gene Families AT4G00590 27.063 3.24e-17 79.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0290 5 6171666 6174043 Ssu1g3752 1 94138265 94140472 PCT