Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3751 ATGACCAGGGGTGGACAAAGAGGTTCTCCATCTGAGAATATGCCTTCCTTGCTGTTGTTGGTATTTCTGATTCAAGCATGGCCAGTGAAGCCACAAGCCGATGATAAGAACATATTTATATTGGCGGGTCAGAGCAACATGGCGGGTCGAGGGGGCGTAGTGAACGACACAGCCACGGGGCTCACCACGTGGGACGGCGTCGTTCCACCCCAGTGCCGTCCCAACCCCTCAATTTTGAGGCTCGACGCGCACCTAACGTGGGTGGAAGCGCGTGAGCCACTCCACGCGGACATCGATGCCAAGAAGACAAACGGGGTAGGGCCGGGAATGGCATTTGCAAACTCGGTGCTGGACAAAAACCCAGGATTCGGTGTAATTGGTTTGGTTCCTTGCGCTATTGGAGGCACCAACATAAGCGATTGGGAGCGCGGAAAAGAGCTTTACAATCACATGATAAAGAGGGCCAAGGCATCGTTGCGCGACGGTGGCACCATTCGTGCTTTGCTATGGTATCAAGGTGAGACCGATACGGTGAATCTACACGATGCACAATCTTACCAAAGAAGAGTCCACAAGTTCTTCTTGGATGTTCGTGATGATCTACAGTCTCCGTTGCTTCCTATAATCCagGTAGCTTTGGCATCTGGATCAGGCCCTTACATAGAGATAGTAAGACAAGCTCAGCTGGGCATTGACCTCCTAAACCTGAGAACTGTGGACGCTCATGGTTTGCCCCTTCAGCCCGATGGGCTACACCTTTCGACCCCGGCCCAGGTGCATCTTGGGAAGAAGGTAGCTAATTCATTCCTTCAGTTCGTACCTTCttcaaatataaatcataatattAGCCCAATCCATAATGAGGCCATCAGGCTTTATAATTGTGCCTTTTATGTTTATATGCTCCCCTTGTTCATAACACTTTTCGCAATTATGTACCCAACTTTCTTATAG 954 0.4927 MTRGGQRGSPSENMPSLLLLVFLIQAWPVKPQADDKNIFILAGQSNMAGRGGVVNDTATGLTTWDGVVPPQCRPNPSILRLDAHLTWVEAREPLHADIDAKKTNGVGPGMAFANSVLDKNPGFGVIGLVPCAIGGTNISDWERGKELYNHMIKRAKASLRDGGTIRALLWYQGETDTVNLHDAQSYQRRVHKFFLDVRDDLQSPLLPIIQVALASGSGPYIEIVRQAQLGIDLLNLRTVDAHGLPLQPDGLHLSTPAQVHLGKKVANSFLQFVPSSNINHNISPIHNEAIRLYNCAFYVYMLPLFITLFAIMYPTFL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3751 317 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 36 271 IPR005181 -
Ssu1g3751 317 Gene3D SGNH hydrolase 35 273 IPR036514 -
Ssu1g3751 317 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 36 272 - -
Ssu1g3751 317 SUPERFAMILY SGNH hydrolase 37 274 - -
Ssu1g3751 317 PANTHER CARBOHYDRATE ESTERASE-RELATED 36 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3751 Ssu-Chr1 94115331 94120558 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0291 5 6182204 6184425 Ssu1g3751 1 94115331 94120558 PCT