Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2801 ATGGCCTTGTCAAGTCCACAAATACAAAGATTCCTCTTACGCAAGCTGCATAGCCGCTCCACCGCCAAGAACACACACAGAAACAGCTTTAGCACCAGTAGCAGAAGCCGGTGCTGCTCTGCCATAGCCATTGATGCTCCATCGTCTTTGACTGAGGTGCCTGGCATAAGATGGGGATCCATAGCCTTGCAGGGTCTCCGTGAAGAGATGGAGGATGATATTATTGTTCGACCCGATGGCCTTCAAGGCTTCTCTTTTGCGGCTGTGTTTGATGGCCATGGAGGATTTTCTTCGGTCGAGTTCCTCAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGGTTACTATTAGTTGAGAAAGATTTCAAAGCCATTAAAGGGGCATTACAGGAGGCATTTCTCAGAGCTGACATGAGGTTATTAAAGCGgCTTGAAATGAGCGGAGAGAAGGACGAATCAGGTGCTACAGCAACTGCCATTTTCATTGGAGATGATGAGCTGCTAATTTCACATATTGGTGACTCATCTGTGGTTCTAAGCAGATCTGGAAAAGCGGAAGTGCTGACTAGTGCTCACCGTCCATATGGGAACAACAAGACTTCtcttgaagaaattaaaagaatcagAGAAGCAGGTGGATGGATTAGCAATGGTAGAATTTGCGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAAAtgctgcaaaaaggagttcaagaAGGAAGATGGTCAGCAAAGTTTATTTCTCGTGTTCAGCTCAACAATGACTTGATTGTTGCATGCCCTGATATTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCCGATGGCTTATGGGATTACATGACCAGCTCAGAAGCAGTTTCTTTAGTGAGGGATCAACTACGAAAACATGGAAACATTCAGCTAGCATGTGAAGTGCTTGCACAAGCTGCTTTGGACCGACGTACACAGGATAATGTCAGCATTATAATTGCCGATTTAGGGAGGACAGACTGGCAGAATGTGCCACTGCAGCaacaaaatgttatatttgaGCTGGTCCAAGCTCTTGTTACCATTGGAATTGTGTCTATTGGAATTTGGTTTTCATCACAGCTTTCTTTATAG 1161 0.4272 MALSSPQIQRFLLRKLHSRSTAKNTHRNSFSTSSRSRCCSAIAIDAPSSLTEVPGIRWGSIALQGLREEMEDDIIVRPDGLQGFSFAAVFDGHGGFSSVEFLRDELYKECVEALQGGLLLVEKDFKAIKGALQEAFLRADMRLLKRLEMSGEKDESGATATAIFIGDDELLISHIGDSSVVLSRSGKAEVLTSAHRPYGNNKTSLEEIKRIREAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLQKGVQEGRWSAKFISRVQLNNDLIVACPDIYQVALGSDAEFVVLASDGLWDYMTSSEAVSLVRDQLRKHGNIQLACEVLAQAALDRRTQDNVSIIIADLGRTDWQNVPLQQQNVIFELVQALVTIGIVSIGIWFSSQLSL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2801 386 SMART PP2C_4 47 343 IPR001932 -
Ssu1g2801 386 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Ssu1g2801 386 CDD PP2Cc 56 345 IPR001932 -
Ssu1g2801 386 PANTHER PROTEIN PHOSPHATASE 2C 6 382 IPR015655 GO:0004722|GO:0006470
Ssu1g2801 386 PANTHER PROTEIN PHOSPHATASE 2C 57 6 382 - -
Ssu1g2801 386 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Ssu1g2801 386 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Ssu1g2801 386 Gene3D - 56 352 IPR036457 -
Ssu1g2801 386 SUPERFAMILY PP2C-like 49 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2801 Ssu-Chr1 74528628 74532674 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2801 1 74528628 74532674 Ssu5g0193 5 4115689 4117627 PCT