Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2090 ATGAAGAGGCACTGGCGCAATAGGAGTCACGACGACGAAAGCCTCCCAGATTTGGATTCCGACACGCGCTCCAACAGGAAATTCCCCCTCACGCGCCTCATGgcactctttctcttttctctcttcctcttttccCTCACTTTCCTTCTCCCACACCCTCCCATCCAATCATCGCCGACAAAAACCCTCCAACTCAAACAAACCCAACaagGTGACATCTCTGATTCTGTTGAGTTGCAAAAAGATAAACTACTTGATGGCCTTCTAGCAGATGGATTTGATGAAAGATCTTGTCGTAGCAGGTACCATTCGGTCACATATGGCAAAGGACTATCAGGAAATCCTTCTTCTTACCTTATTTCTAGGTTGAGAAAATATGAAGCTCTCCACAAAGAATGTGGACCTTACACTGAATCCTATAATAAAACGGTGAGAGATCTCAGGTCTGGTCATTTAGGTGAGTCCCCAGCATGTAAATATGTGGTATGGATTTCATATAGTGGGTTAGGGAATAGGATATTGACCTTAGCTTCTGCATTTCTATATGCACTCCTCACTAATCGTGTTCTATTGGTTGATCCTGGAGTTGATATGGTGGATCTTTTTTGTGAACCGTTTCCACATGTTTCCTGGTTTCTCCCTCCTGATTTCCCTCTCAACAGTCAATTTCCCAATTTTGATCAGAAATCTGATCAATGTTATGGGAAAATGCTGAAAAACAAATCAACTACAAACTCCATGGTGCCACCGTCTTTTGTCTACCTTCATCTAGGccatgactatgatgatcaggACAAGCTTTTCTTCTGTGATGAAGATCAAACTTTTCTTAAGAAAGTACCATGGTTAGTGGTGAGAACAGATAATTACTTTGTCCCATCTCTATTCCTGATGCCATCTTTTGAGCAGGAACTGAGTGATCTCTTTCCAAACAAGGAAACAGTTTTTCATTTCCTGGGTAGATATCTGTTCCACCCTACCAACAAAGTATGGGGACTTGTTAGCAGATACTATCAAGCTTATTTAGCTAATGTTGATGAAAGAGTAGGCATCCAAATAAGAGTGTTTGACACTGGAACTGGTCCATTTCAACACGTATTGGATCAGATCTTAGCTTGCTCTTTGAAGGATAATCTTTTGCCTGATGTTAACCGGAAGGGGGATGTTGTTAGTTCATCAGGAAAGCCAAAGTCAAAAGCTGTGCTGATGACATCCTTGAGCTCtggttattttgaaaaagtgaGAGACATGTATTGGGAATATCCTACTGTGACAGGAGAGGTTGTTGGCATTTACCAGCCAAGCCATGAAGAGTATCAACAAACAGAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTACCTCTTGAGCTTGACCGACATGTTGGTCACGAGCTCATGGTCTACTTTTGGCTACGTGGCCCAGGGGCTTGGAGGCTTGAAGCCATGGATACTATACAAACCTGAGAATGGAACAGCCCCTGATCCTCCTTGTCAACGTGCCATGTCAATGGAGCCATGCTTCCATGCTCCTCCCTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACTGGTGCACTTGTTCCACATGTAAGGCACTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTAGACAATTATAGTTGGCAATAA 1659 0.4135 MKRHWRNRSHDDESLPDLDSDTRSNRKFPLTRLMALFLFSLFLFSLTFLLPHPPIQSSPTKTLQLKQTQQGDISDSVELQKDKLLDGLLADGFDERSCRSRYHSVTYGKGLSGNPSSYLISRLRKYEALHKECGPYTESYNKTVRDLRSGHLGESPACKYVVWISYSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPFPHVSWFLPPDFPLNSQFPNFDQKSDQCYGKMLKNKSTTNSMVPPSFVYLHLGHDYDDQDKLFFCDEDQTFLKKVPWLVVRTDNYFVPSLFLMPSFEQELSDLFPNKETVFHFLGRYLFHPTNKVWGLVSRYYQAYLANVDERVGIQIRVFDTGTGPFQHVLDQILACSLKDNLLPDVNRKGDVVSSSGKPKSKAVLMTSLSSGYFEKVRDMYWEYPTVTGEVVGIYQPSHEEYQQTEKQMHNQKAWAEMYLLSLTDMLVTSSWSTFGYVAQGLGGLKPWILYKPENGTAPDPPCQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDNYSWQ 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2090 552 Gene3D - 156 201 - -
Ssu1g2090 552 Pfam Xyloglucan fucosyltransferase 62 519 IPR004938 GO:0008107|GO:0016020|GO:0042546
Ssu1g2090 552 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 552 - -
Ssu1g2090 552 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
Ssu1g2090 552 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2090 Ssu-Chr1 59454812 59457279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2090 27 546 Xyloglucan Fucosyltransferase1 AT2G03220 62.572 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2090 K13681 - gmx:100775878 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2090 1 59454812 59457279 Ssu1g2090 1 59454812 59457279 ECH