Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g0098 ATGTCCATCTTCTTCAGattctctctcctcttccttcttcctctcttcctttctccGGCCTTCGCTTCCGAGTCAGATCACAGGTATCAACAAGATGAGCCAGTTACCCTTTGGGTGAACAAAGTTGGTCCTTATAACAATCCACAAGAGACATACAATTATTACAGCCTACCATTTTGCCGTTCACCTGGTAATCCTGCACACAAATGGGGTGGTCTTGGTGAGGTCCTGGGTGGCAATGAACTCATTGATAGCCAACTTGAGATAAAGTTCCTAGgaAATGTGGAAAAGACCACCTTTTGCCGTGTGGAACTTGATGAAGCAAAGGTTAGACAGTTCAAGGATGCAATAGAGAATAATTACTGGTTTGAATTCTTCGTGGATGACCTTCCATTGTGGGGGTATGTTGGCGAGCTACATCCTGATAAGAACAGTGATAATGGCAAGCATGTCCTTTACACACACAAGAACATCAAAGTTAAATACAATAAAGATCAGATCATTCATGTTAATCTAACTCAGGACAACCCAAAGCCTCTGGAAGTAGGAAGATCTTTGGACATGACATATTCTGTCAAATGGACTCCTACGAATGTCACTTTCGGACGCCGTTTTGATGTATACCTGGACTATCCGTTCTTTGAGCATCAGATTCATTGGTtctccatttttaattcttttatgatGGTCATCTTCCTTACTGGATTGGTGTCAATGATATTAATGCGAACTTTGAGAAATGACTATGCAAAGTATGCTCGGGAAGATGATGATTTGGAAACTCTGGAAAGAGATGTTAGTGAAGAATCTGGCTGGAAACTCGTGCATGGTGATGTTTTTCGGCCTCCTCGTAGTTTGGTTGTTCTTTCAGCTGTTGTTGGTACAGGTGCTCAGCTTGCATTGCTGGTTCTTCTTGTCATCTTGTTGGCTATTGTTGGGATGTTGTATGTTGGACGAGGAGCCATTGTCACAACCTTCATTGTATGCTATGCTCTCACATCTTTCATTTCTGGTTATGTGAGTGGGGGGATGTACTCACGTAATGGGGGTAAAAATTGGATTAAATCCATGATCCTTACAGCATCTCTGTTCCCATTCATGTGCTTTGGAATTGGATTTATATTAAACACAATTGCTATATTCTATGGATCTCTAGCCGCAATCCCCTTTGGTACTATGGTGGTTGTCTTTGTTATTTGGGCTTTTATCTCTTTCCCTCTAGCACTTCTTGGCACAGTTGTTGGAAGAAACTGGAGTGGTGCTCCTAATAATCCATGTCGTGTGAAGACCATTCCTCGTCCCATTCCTGAGAAGAAGTGGTACCTCACACCATCTGTAGTTTCTCTGATGGGAGGACTGCTTCCCTTTGGCAGCATATTCATCGAGATGTATTTTGTATTCACTTCCTTCTGGAATTACAAGGTGTACTATGTCTATGGCTTCATGCTTCTGGTTTTTCTGATTCTTATCATTGTTACTGTTTGTGTGACAATTGTGGGGacctactttttgttgaatgctGAGAACTACCACTGGCAATGGACTTCTTTCTTTTCAGCTGCCTCAACAGCTGTTTATGTGTATTTGTACTCAGTCTACTACTACTATGTGAAGACGAAGATGTCAGGCTTCTTCCAAACCAGCTTCTATTTTGGATACACTTTGATGTTTTGTCTTGGATTGGGAATTCTCTGTGGAGCTGTGGGTTATCTTGGTTCGAATTTGTTTGTGAGGAGGATCTACAGAAACATCAAGTGTGACTAA 1764 0.3991 MSIFFRFSLLFLLPLFLSPAFASESDHRYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCRSPGNPAHKWGGLGEVLGGNELIDSQLEIKFLGNVEKTTFCRVELDEAKVRQFKDAIENNYWFEFFVDDLPLWGYVGELHPDKNSDNGKHVLYTHKNIKVKYNKDQIIHVNLTQDNPKPLEVGRSLDMTYSVKWTPTNVTFGRRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLRNDYAKYAREDDDLETLERDVSEESGWKLVHGDVFRPPRSLVVLSAVVGTGAQLALLVLLVILLAIVGMLYVGRGAIVTTFIVCYALTSFISGYVSGGMYSRNGGKNWIKSMILTASLFPFMCFGIGFILNTIAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIIVTVCVTIVGTYFLLNAENYHWQWTSFFSAASTAVYVYLYSVYYYYVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSNLFVRRIYRNIKCD 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g0098 587 Pfam Endomembrane protein 70 51 544 IPR004240 GO:0016021
Ssu1g0098 587 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 8 587 IPR004240 GO:0016021
Ssu1g0098 587 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 8 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g0098 Ssu-Chr1 3300688 3306129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g0098 18 587 Miscellaneous Gene Families AT1G10950 90.000 0.0 1013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g0098 1 3300688 3306129 Ssu5g2586 5 70385970 70398088 PCT