Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g03079 ATGGAAGAAATAGGTCCCAATTCATGCGCAAGGCCAGCGTTAGAGAAGAAAGTAAGACCACAAGAGCAACTGAATTGTCCAAGGTGCAGTTCAACCAACACAAAGTTCTGTTATTACAACAATTACAGCCTCACACAGCCAAGGTACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGTTCACTCAGAAACGTCCCCGTTGGAGGTGGCTCTAGGAAGAACAAGAAGGTCACCTCATCAAGGGTTCCTGACTTGAATCCACCAAGCCTCTCATCAGTCTCGGTTATTTCTTCCCAAAACCCTAAAATGCAAGGAGTCCATGATCTTAATTTGGCTTTTCCTGCAGCTATGGACAAGTATCATGGCATGTCTCCATATCTTGAGATGCCAAAACTTGAAATTGGTGGTGACAGTGCCAGTCACCACCATAGCCCTTCTTCGGCTCCAACTTCACTTTCATCACCATATGGCATGATGTCTAGGGGTTTGAATCCTTATGCTCCTAATTCCTTCATGACAAGCTCAGATTCACTTTACACACCGAGCTATCCCATGCAAGAAATTAAACCAAACCTTAGCTTTTCAGTTGATGGGTTTGGAAATAGATCACGTGGGGTTCAAGAGAACGGTGGTGGTGGGAGGCTTTTGTTCCCCTTTGGAGAAATCAAGCACCTTTCTGCAGGTGTTCAAGTTGAACAAAATAAAGAACAAGGAAATAATCCAACTGGATACTGGACTGGAATGATCGGTGAAGGGTCATCATGGTAA 774 0.4432 MEEIGPNSCARPALEKKVRPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVTSSRVPDLNPPSLSSVSVISSQNPKMQGVHDLNLAFPAAMDKYHGMSPYLEMPKLEIGGDSASHHHSPSSAPTSLSSPYGMMSRGLNPYAPNSFMTSSDSLYTPSYPMQEIKPNLSFSVDGFGNRSRGVQENGGGGRLLFPFGEIKHLSAGVQVEQNKEQGNNPTGYWTGMIGEGSSW 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g03079 257 MobiDBLite consensus disorder prediction 75 96 - -
Spst9g03079 257 MobiDBLite consensus disorder prediction 65 96 - -
Spst9g03079 257 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Spst9g03079 257 MobiDBLite consensus disorder prediction 142 158 - -
Spst9g03079 257 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Spst9g03079 257 MobiDBLite consensus disorder prediction 136 158 - -
Spst9g03079 257 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 144 IPR045174 GO:0003700|GO:0006355
Spst9g03079 257 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g03079 Spst-Chr9 64700595 64701368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g03079 16 257 C2C2-Dof Transcription Factor Family AT3G61850 48.339 1.78e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Spst9g03079 zf-Dof 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g03079 - - gmx:100775598 398.667